CapteG131555 (Capitella teleta)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CapteG131555 T318048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx7
M00823_2.00 		Mus musculus
GTYRCYRNSB
VSNYRGYRAC		 PBM
Weirauch et al.(2013)
pTH3516 		0.690 0.506
Rfx7
M00187_2.00 		Mus musculus
BGTHDYYRNN
NNYRRHDACV		 PBM
Badis et al.(2009)
Rfxdc2_3516 		0.690 0.506
RFX7
M05729_2.00 		Homo sapiens
BGTTRCYRY
RYRGYAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX 		0.690 0.506
RFX7
M05730_2.00 		Homo sapiens
BGTTGCYRB
VYRGCAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX 		0.690 0.506
RFX5
M03458_2.00 		Homo sapiens
BGTTRCYATRGYAACV
BGTTRCYATRGYAACV		 SELEX
Jolma et al.(2013)
RFX5_1 		0.687 0.494
RFX5
M03459_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_2 		0.687 0.494
RFX5
M03460_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_3 		0.687 0.494
RFX5
M05725_2.00 		Homo sapiens
BGTTRCYANGBGTTGCYRN
NYRGCAACVCNTRGYAACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_1 		0.687 0.494
RFX5
M05726_2.00 		Homo sapiens
NYRVYAACSGTTRCYAN
NTRGYAACSGTTRBYRN		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_2 		0.687 0.494
RFX5
M08009_2.00 		Homo sapiens
KCRBYDGTTRCYRRG
CYYRGYAACHRVYGM		 ChIP-seq
Gerstein et al.(2012)
GM12878_RFX5_Stanford 		0.687 0.494
RFX5
M08010_2.00 		Homo sapiens
DBVBYDGTTGCYRGGBVRR
YYBVCCYRGCAACHRVBVH		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RFX5_Stanford 		0.687 0.494
RFX5
M08011_2.00 		Homo sapiens
TCVBYDGTTDCYRDG
CHYRGHAACHRVBGA		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_RFX5_Stanford 		0.687 0.494
RFX5
M08012_2.00 		Homo sapiens
YDGTTRCYRKGBVRV
BYBVCMYRGYAACHR		 ChIP-seq
Gerstein et al.(2012)
HepG2_RFX5_Stanford 		0.687 0.494
RFX5
M09364_2.00 		Homo sapiens
VNNVBYDGTTGCYRKGNVRV
BYBNCMYRGCAACHRVBNNB		 Misc
Kulakovskiy et al.(2013)
RFX5_HUMAN.H11MO.0.A 		0.687 0.494
RFX5
M09629_2.00 		Homo sapiens
NDGTTRCYADGV
BCHTRGYAACHN		 Misc
Heinz et al.(2010)
GM12878-Rfx5_GSE31477 		0.687 0.494
RFX5
M11249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_03 		0.687 0.494
RFX5
M11250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_05 		0.687 0.494
RFX5
M05727_2.00 		Homo sapiens
BGTYRYYRNGBGTTGYYRN
NYRRCAACVCNYRRYRACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_1 		0.687 0.494
RFX5
M05728_2.00 		Homo sapiens
NTRGYAASSGTYRBYRN
NYRVYRACSSTTRCYAN		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_2 		0.687 0.494
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP131555 RFX 38 116

Links

Other RFX family TFs
Other Capitella teleta TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HmN_000672900 Hymenolepis microstoma HmN_000672900 I 0.722
HDID_0000095701 Hymenolepis diminuta HDID_0000095701 I 0.722
Smp_040350 Schistosoma mansoni Smp_040350 I 0.721
A_01977 Schistosoma haematobium A_01977 I 0.721
TTAC_0000027401 Hydatigera taeniaeformis TTAC_0000027401 I 0.719
TsM_000553100 Taenia solium TsM_000553100 I 0.719
HNAJ_0001122601 Hymenolepis nana HNAJ_0001122601 I 0.719
ECANG7_06078 Echinococcus canadensis ECANG7_06078 I 0.719
EmuJ_001055400 Echinococcus multilocularis EmuJ_001055400 I 0.719
SROB_0001335501 Schistosoma rodhaini SROB_0001335501 I 0.715
Sjc_0019090 Schistosoma japonicum Sjc_0019090 I 0.715
csin102559 Clonorchis sinensis csin102559 I 0.713
T265_11740 Opisthorchis viverrini T265_11740 I 0.713
SMU15027042 Schmidtea mediterranea SMU15027042 I 0.709
LotgiG138119 Lottia gigantea LotgiG138119 I 0.704
Ocbimv22017482m.g Octopus bimaculoides Ocbimv22017482m.g I 0.701
SPU_027998 Strongylocentrotus purpuratus SPU_027998 I 0.701
ENSGMOG00000002477 Gadus morhua ENSGMOG00000002477 I 0.698
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I 0.696
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I 0.696
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I 0.696
rfx5 Danio rerio ENSDARG00000063258 I 0.696
ENSPMAG00000005066 Petromyzon marinus ENSPMAG00000005066 I 0.696
Hsal_12778--XP_001120516.1_APIME Harpegnathos saltator Hsal_12778--XP_001120516.1_APIME I 0.695
GB49419 Apis mellifera GB49419 I 0.695
SINV24627 Solenopsis invicta SINV24627 I 0.695
rfx7 Gasterosteus aculeatus ENSGACG00000015838 I 0.695
ENSTRUG00000000177 Takifugu rubripes ENSTRUG00000000177 I 0.695
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I 0.695
ACEP24602 Atta cephalotes ACEP24602 I 0.695
ENSONIG00000005780 Oreochromis niloticus ENSONIG00000005780 I 0.694
ENSLOCG00000013505 Lepisosteus oculatus ENSLOCG00000013505 I 0.694
rfx7 Oryzias latipes ENSORLG00000008583 I 0.694
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I 0.694
ENSAMXG00000020093 Astyanax mexicanus ENSAMXG00000020093 I 0.694
LDEC011897 Leptinotarsa decemlineata LDEC011897 I 0.694
ENSXMAG00000006676 Xiphophorus maculatus ENSXMAG00000006676 I 0.693
ENSXMAG00000003651 Xiphophorus maculatus ENSXMAG00000003651 I 0.693
NV23037 Nasonia vitripennis NV23037 I 0.693
rfx5 Xenopus tropicalis XB-GENE-5942579 I 0.693
ENSGMOG00000004164 Gadus morhua ENSGMOG00000004164 I 0.693
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I 0.693
RFX7 Gasterosteus aculeatus ENSGACG00000006090 I 0.693
ENSONIG00000008334 Oreochromis niloticus ENSONIG00000008334 I 0.693
RFX7 Oryzias latipes ENSORLG00000005342 I 0.693
rfx7 Danio rerio ENSDARG00000077237 I 0.693
RFX7 Danio rerio ENSDARG00000103691 I 0.693
ENSAMXG00000014807 Astyanax mexicanus ENSAMXG00000014807 I 0.693
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I 0.692
ENSPFOG00000002938 Poecilia formosa ENSPFOG00000002938 I 0.692
NEMVEDRAFT_v1g25228 Nematostella vectensis NEMVEDRAFT_v1g25228 I 0.691
RFX7 Monodelphis domestica ENSMODG00000008136 I 0.690
ENSMPUG00000002204 Mustela putorius furo ENSMPUG00000002204 I 0.690
Rfx7 Rattus norvegicus ENSRNOG00000060367 I 0.690
RFX7 Procavia capensis ENSPCAG00000004974 I 0.690
ENSPPYG00000006502 Pongo abelii ENSPPYG00000006502 I 0.690
ENSPSIG00000014731 Pelodiscus sinensis ENSPSIG00000014731 I 0.690
RFX7 Pan troglodytes ENSPTRG00000007104 I 0.690
ENSPANG00000017297 Papio anubis ENSPANG00000017297 I 0.690
ENSTSYG00000002441 Tarsius syrichta ENSTSYG00000002441 I 0.690
ENSNLEG00000006658 Nomascus leucogenys ENSNLEG00000006658 I 0.690
RFX7 Ornithorhynchus anatinus ENSOANG00000008526 I 0.690
RFX7 Oryctolagus cuniculus ENSOCUG00000013678 I 0.690
ENSSHAG00000003875 Sarcophilus harrisii ENSSHAG00000003875 I 0.690
Rfx7 Mus musculus ENSMUSG00000037674 D 0.690
RFX7 Homo sapiens ENSG00000181827 D 0.690
ENSFALG00000012087 Ficedula albicollis ENSFALG00000012087 I 0.690
RFX7 Dasypus novemcinctus ENSDNOG00000044983 I 0.690
RFX7 Choloepus hoffmanni ENSCHOG00000003451 I 0.690
RFX7 Bos taurus ENSBTAG00000000565 I 0.690
ENSAPLG00000005911 Anas platyrhynchos ENSAPLG00000005911 I 0.690
ENSLACG00000015878 Latimeria chalumnae ENSLACG00000015878 I 0.690
ENSCSAG00000011819 Chlorocebus sabaeus ENSCSAG00000011819 I 0.690
RFX7 Meleagris gallopavo ENSMGAG00000005745 I 0.690
ENSCPOG00000005366 Cavia porcellus ENSCPOG00000005366 I 0.690
RFX7 Canis familiaris ENSCAFG00000016029 I 0.690
RFX7 Vicugna pacos ENSVPAG00000012402 I 0.690
ENSAMEG00000018368 Ailuropoda melanoleuca ENSAMEG00000018368 I 0.690
RFX7 Loxodonta africana ENSLAFG00000018745 I 0.690
Gfo_R003263 Geospiza fortis Gfo_R003263 I 0.689
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I 0.689
RFX7 Anolis carolinensis ENSACAG00000008482 I 0.689
rfx7 Xenopus tropicalis XB-GENE-1008447 I 0.689
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I 0.689
rfx7 Takifugu rubripes ENSTRUG00000017897 I 0.688
CGI_10006904 Crassostrea gigas CGI_10006904 I 0.688
RFX5 Gallus gallus ENSGALG00000000836 I 0.688
RFX7 Pteropus vampyrus ENSPVAG00000005381 I 0.688
RFX5 Pteropus vampyrus ENSPVAG00000011680 I 0.687
Rfx5 Rattus norvegicus ENSRNOG00000021012 I 0.687
RFX5 Sorex araneus ENSSARG00000000750 I 0.687
RFX5 Tupaia belangeri ENSTBEG00000006419 I 0.687
RFX5 Pan troglodytes ENSPTRG00000001286 I 0.687
RFX7 Takifugu rubripes ENSTRUG00000008008 I 0.687
RFX5 Tursiops truncatus ENSTTRG00000007023 I 0.687
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I 0.687
RFX5 Sus scrofa ENSSSCG00000006625 I 0.687
Pvit_04986 Pogona vitticeps Pvit_04986 I 0.687
RFX7 Tursiops truncatus ENSTTRG00000010051 I 0.687
ENSP00000389130 Macaca fascicularis ENSP00000389130 I 0.687
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I 0.687
e_gw.237.152.1 Branchiostoma floridae e_gw.237.152.1 I 0.687
RFX7 Tetraodon nigroviridis ENSTNIG00000013706 I 0.687
RFX5 Homo sapiens ENSG00000143390 D 0.687
RFX5 Echinops telfairi ENSETEG00000013503 I 0.687
RFX5 Gorilla gorilla ENSGGOG00000016795 I 0.687
RFX5 Loxodonta africana ENSLAFG00000030906 I 0.687
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I 0.687
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I 0.687
RFX5 Equus caballus ENSECAG00000024774 I 0.687
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I 0.687
RFX5 Canis familiaris ENSCAFG00000012661 I 0.687
RFX5 Bos taurus ENSBTAG00000017580 I 0.687
RFX5 Callithrix jacchus ENSCJAG00000007482 I 0.687
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I 0.687
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I 0.687
Rfx5 Mus musculus ENSMUSG00000005774 I 0.687
RFX5 Felis catus ENSFCAG00000005568 I 0.687
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I 0.687
AAEL013752 Aedes aegypti AAEL013752 I 0.687
RFX7 Otolemur garnettii ENSOGAG00000031795 I 0.687
RFX5 Otolemur garnettii ENSOGAG00000008120 I 0.687
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I 0.687
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I 0.687
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I 0.687
ENSOARG00000020885 Ovis aries ENSOARG00000020885 I 0.687
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I 0.687
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I 0.686
CPIJ006094 Culex quinquefasciatus CPIJ006094 I 0.686
RFX5 Procavia capensis ENSPCAG00000011056 I 0.686
CpipJ_CPIJ006094 Culex pipiens CpipJ_CPIJ006094 I 0.686
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I 0.686
TC008959 Tribolium castaneum TC008959 I 0.685
Aan_R011989 Calypte anna Aan_R011989 I 0.685
AMIN003942 Anopheles minimus AMIN003942 I 0.685
AQUA006870 Anopheles quadriannulatus AQUA006870 I 0.685
ASTEI04100 Anopheles stephensi ASTEI04100 I 0.685
AMEC002251 Anopheles melas AMEC002251 I 0.685
AEPI006624 Anopheles epiroticus AEPI006624 I 0.685
ACUA017169 Anopheles culicifacies ACUA017169 I 0.685
ASIS020285 Anopheles sinensis ASIS020285 I 0.685
RFX7 Equus caballus ENSECAG00000002379 I 0.685
AATE016751 Anopheles atroparvus AATE016751 I 0.685
AMEM009524 Anopheles merus AMEM009524 I 0.685
AARA004226 Anopheles arabiensis AARA004226 I 0.685
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I 0.685
DAPPUDRAFT_64123 Daphnia pulex DAPPUDRAFT_64123 I 0.685
ACHR008891 Anopheles christyi ACHR008891 I 0.685
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I 0.685
ACOM036649 Anopheles coluzzii ACOM036649 I 0.685
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I 0.685
ENSP00000397644-D1 Bos grunniens ENSP00000397644-D1 I 0.685
AALB008384 Anopheles albimanus AALB008384 I 0.685
Gfo_R004305 Geospiza fortis Gfo_R004305 I 0.685
Afo_R011605 Aptenodytes forsteri Afo_R011605 I 0.685
ADIR010232 Anopheles dirus ADIR010232 I 0.685
AGAP013226 Anopheles gambiae AGAP013226 I 0.685
AFUN011072 Anopheles funestus AFUN011072 I 0.685
RFX7 Myotis lucifugus ENSMLUG00000028676 I 0.685
AFAF011654 Anopheles farauti AFAF011654 I 0.685
RFX7 Taeniopygia guttata ENSTGUG00000006356 I 0.685
ADAC008404 Anopheles darlingi ADAC008404 I 0.685
RFX7 Felis catus ENSFCAG00000029408 I 0.685
RFX5 Myotis lucifugus ENSMLUG00000015218 I 0.685
Afo_R007667 Aptenodytes forsteri Afo_R007667 I 0.684
rfx5.S Xenopus laevis XB-GENE-6079297 I 0.684
RFX7 Sorex araneus ENSSARG00000010801 I 0.684
ENSMMUP00000033587 Macaca fascicularis ENSMMUP00000033587 I 0.684
Ogr13052 Ophisaurus gracilis Ogr13052 I 0.684
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I 0.684
RFX7 Macaca mulatta ENSMMUG00000017801 I 0.684
rfx7 Tetraodon nigroviridis ENSTNIG00000009322 I 0.684
MDOA009335 Musca domestica MDOA009335 I 0.683
L798_03377 Zootermopsis nevadensis L798_03377 I 0.683
RFX7 Erinaceus europaeus ENSEEUG00000013718 I 0.683
tetur02g00620 Tetranychus urticae tetur02g00620 I 0.683
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I 0.683
LCUP014592 Lucilia cuprina LCUP014592 I 0.683
Myotis_brandtii_RFX7_10006263 Myotis brandtii Myotis_brandtii_RFX7_10006263 I 0.682
GH18082 Drosophila grimshawi FBgn0125550 I 0.682
GA21990 Drosophila pseudoobscura FBgn0081975 I 0.682
CLEC011984 Cimex lectularius CLEC011984 I 0.682
CG9727 Drosophila melanogaster FBgn0037445 I 0.682
GI24583 Drosophila mojavensis FBgn0147305 I 0.682
GG10435 Drosophila erecta FBgn0102744 I 0.682
GJ22650 Drosophila virilis FBgn0209754 I 0.682
GL22063 Drosophila persimilis FBgn0159655 I 0.682
GE24099 Drosophila yakuba FBgn0241238 I 0.682
GD19544 Drosophila simulans FBgn0191039 I 0.682
GM10553 Drosophila sechellia FBgn0165499 I 0.682
GK13786 Drosophila willistoni FBgn0215794 I 0.682
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I 0.681
Alligator_sinensis_CCG008945.1 Alligator sinensis Alligator_sinensis_CCG008945.1 I 0.681
GF16654 Drosophila ananassae FBgn0093675 I 0.681
Brh_R008414 Buceros rhinoceros Brh_R008414 I 0.681
Pvit_17399 Pogona vitticeps Pvit_17399 I 0.680
RFX5 Erinaceus europaeus ENSEEUG00000010785 I 0.679
KGM_16732 Danaus plexippus KGM_16732 I 0.678
HMEL011744 Heliconius melpomene HMEL011744 I 0.678
MCINX003210 Melitaea cinxia MCINX003210 I 0.677
ECPE_0001841201 Echinostoma caproni ECPE_0001841201 I 0.677
XP_002167798.1 Hydra magnipapillata XP_002167798.1 I 0.677
Cflo_11342--XP_001120516.1_APIME Camponotus floridanus Cflo_11342--XP_001120516.1_APIME I 0.677
PHUM035280 Pediculus humanus PHUM035280 I 0.677
Aan_R010941 Calypte anna Aan_R010941 I 0.675
SCUD_0001838101 Schistosoma curassoni SCUD_0001838101 I 0.673
D915_00887 Fasciola hepatica D915_00887 I 0.672
ISCW001129 Ixodes scapularis ISCW001129 I 0.672
RFX7 Echinops telfairi ENSETEG00000015037 I 0.670
BGIBMGA007758 Bombyx mori BGIBMGA007758 I 0.670
Cmyd_10007628 Chelonia mydas Cmyd_10007628 I 0.662
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.661
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.660
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.660
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.660
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.660
Ogr11408 Ophisaurus gracilis Ogr11408 I 0.659
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.657
tetur05g07120 Tetranychus urticae tetur05g07120 N 0.655
fgenesh2_pg.scaffold_3000303 Monosiga brevicollis fgenesh2_pg.scaffold_3000303 I 0.655
ENSSSCG00000024042 Sus scrofa ENSSSCG00000024042 I 0.655
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.654
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.654
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.654
KUCA_T00003838001 Kuraishia capsulata KUCA_T00003838001 I 0.653
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.653
ENSMEUG00000007846 Macropus eugenii ENSMEUG00000007846 I 0.653
RFX7 Ochotona princeps ENSOPRG00000003155 I 0.653
CapteG108705 Capitella teleta CapteG108705 I 0.653
CGI_10016120 Crassostrea gigas CGI_10016120 I 0.653
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.652
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.652
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.652
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.652
TriadG51992 Trichoplax adhaerens TriadG51992 I 0.651
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.651
ISCW014107 Ixodes scapularis ISCW014107 N 0.651
Aqu1.223491 Amphimedon queenslandica Aqu1.223491 I 0.651
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.651