gw1.204.1.1 (Dictyostelium purpureum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.204.1.1 T334234_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.447 0.435
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.447 0.435
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.447 0.435
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.447 0.435
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.204.1.1 Sox 8 76

Links

Other Sox family TFs
Other Dictyostelium purpureum TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgeneshDP_kg.C_scaffold_93000006 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_93000006 I 0.711
estExt_fgeneshDP_kg.C_1050006 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1050006 I 0.710
fgeneshDP_kg.C_scaffold_625000001 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_625000001 I 0.656
EFA82179.1 Polysphondylium pallidum EFA82179.1 I 0.624
nhp6 Dictyostelium discoideum DDB_G0270260 N 0.548
PGTG_04701 Puccinia graminis PGTG_04701 I 0.515
PTTG_09594 Puccinia triticina PTTG_09594 I 0.515
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.498
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I 0.492
J056_004689 Wallemia ichthyophaga J056_004689 I 0.490
WALSEDRAFT_53977 Wallemia sebi WALSEDRAFT_53977 I 0.490
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.480
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.478
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.475
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.475
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.473
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.473
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.473
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.473
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I 0.472
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.468
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.466
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.463
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.463
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.461
JAAARDRAFT_49184 Jaapia argillacea JAAARDRAFT_49184 I 0.461
PILCRDRAFT_812728 Piloderma croceum PILCRDRAFT_812728 I 0.461
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.460
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.460
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I 0.459
PHLGIDRAFT_113118 Phlebiopsis gigantea PHLGIDRAFT_113118 I 0.456
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.456
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.454
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.454
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.454
M422DRAFT_51665 Sphaerobolus stellatus M422DRAFT_51665 I 0.453
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.453
M422DRAFT_60408 Sphaerobolus stellatus M422DRAFT_60408 I 0.453
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.451
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.447
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.447
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.447
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.447
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.447
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.447
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.447
G210_1137 Candida maltosa G210_1137 I 0.447
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.447
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.447
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.447
NHP6A Saccharomyces cerevisiae YPR052C D 0.447
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.447
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.447
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.447
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.447
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.447
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.447
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.447
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.447
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.447
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.447
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.447
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I 0.446
Cla017295 Citrullus lanatus Cla017295 I 0.446
CERSUDRAFT_85760 Ceriporiopsis subvermispora CERSUDRAFT_85760 I 0.446
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.446
DICSQDRAFT_109066 Dichomitus squalens DICSQDRAFT_109066 I 0.446
FIBRA_06299 Fibroporia radiculosa FIBRA_06299 I 0.446
GSMUA_Achr2G19630_001 Musa acuminata GSMUA_Achr2G19630_001 I 0.445
CNF04730 Cryptococcus neoformans CNF04730 I 0.445
L804_02852 Cryptococcus gattii L804_02852 I 0.445
TCM_018380 Theobroma cacao TCM_018380 I 0.445
AMTR_s00078p00107740 Amborella trichopoda AMTR_s00078p00107740 I 0.445
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.443
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.442
Bra033055 Brassica rapa Bra033055 N 0.442
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.442
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.442
gw1.32.10.1 Bigelowiella natans gw1.32.10.1 N 0.441
PHSY_006278 Pseudozyma hubeiensis PHSY_006278 I 0.441
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.439
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.439
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.439
PHACADRAFT_164552 Phanerochaete carnosa PHACADRAFT_164552 I 0.437
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.435
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.435
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.435
Pm015842 Prunus mume Pm015842 I 0.435
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.435
KNAG_0J02470 Kazachstania naganishii KNAG_0J02470 I 0.435
Ca_10804 Cicer arietinum Ca_10804 I 0.435
MDP0000828844 Malus domestica MDP0000828844 I 0.435
PK18077.1 Cannabis sativa PK18077.1 I 0.435
Ca_12487 Cicer arietinum Ca_12487 I 0.435
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.435
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.435
mgf001267m Mimulus guttatus mgf001267m I 0.433
MDP0000310093 Malus domestica MDP0000310093 I 0.433
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.432
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.432
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.432
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.432
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.432
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.431
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.427
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I 0.427
GALMADRAFT_227783 Galerina marginata GALMADRAFT_227783 I 0.427
GLOTRDRAFT_99857 Gloeophyllum trabeum GLOTRDRAFT_99857 I 0.427
Moror_35 Moniliophthora roreri Moror_35 I 0.427
M413DRAFT_45791 Hebeloma cylindrosporum M413DRAFT_45791 I 0.427
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.427
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.426
SOCG_02294 Schizosaccharomyces octosporus SOCG_02294 I 0.426
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.425
29701.m000600 Ricinus communis 29701.m000600 I 0.424
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.424
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.424
SPOG_00531 Schizosaccharomyces cryophilus SPOG_00531 I 0.424
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.423
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.423
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.423
SSRP1 Arabidopsis thaliana AT3G28730 I 0.423
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.423
MSY001_2636 Malassezia sympodialis MSY001_2636 I 0.422
UM02364 Ustilago maydis UM02364 I 0.422
PaG_04789 Pseudozyma aphidis PaG_04789 I 0.422
PAN0_004d2231 Pseudozyma antarctica PAN0_004d2231 I 0.422
PSEUBRA_SCAF4g05002 Pseudozyma brasiliensis PSEUBRA_SCAF4g05002 I 0.422
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.421
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.420
e_gw1.7.444.1 Tremella mesenterica e_gw1.7.444.1 I 0.420
CC1G_11882 Coprinopsis cinerea CC1G_11882 I 0.420
A1Q1_01571 Trichosporon asahii A1Q1_01571 I 0.420
AGABI2DRAFT_56560 Agaricus bisporus AGABI2DRAFT_56560 I 0.420
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.420
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.420
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.420
PLEOSDRAFT_1048718 Pleurotus ostreatus PLEOSDRAFT_1048718 I 0.420
K443DRAFT_671387 Laccaria amethystina K443DRAFT_671387 I 0.418
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.418
LACBIDRAFT_184303 Laccaria bicolor LACBIDRAFT_184303 I 0.418
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.418
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.418
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.418
Pm002934 Prunus mume Pm002934 I 0.418
PK11149.1 Cannabis sativa PK11149.1 I 0.418
MPER_13045 Moniliophthora perniciosa MPER_13045 I 0.417
Ciclev10012868m.g Citrus clementina Ciclev10012868m.g I 0.417
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.417
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.416
MCYG_05548 Microsporum canis MCYG_05548 I 0.416
ARB_02895 Arthroderma benhamiae ARB_02895 I 0.416
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.416
TRV_07738 Trichophyton verrucosum TRV_07738 I 0.416
SMAC_04223 Sordaria macrospora SMAC_04223 I 0.416
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.416
MCYG_05548 Arthroderma otae MCYG_05548 I 0.416
H105_01968 Trichophyton soudanense H105_01968 I 0.416
TESG_06912 Trichophyton tonsurans TESG_06912 I 0.416
MGYG_02637 Microsporum gypseum MGYG_02637 I 0.416
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.416
PDE_04795 Penicillium oxalicum PDE_04795 I 0.416
H102_01953 Trichophyton rubrum H102_01953 I 0.416
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.416
MBM_05761 Marssonina brunnea MBM_05761 I 0.416