AMTR_s00021p00223240 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00021p00223240 T000354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF023
M06560_2.00 		Arabidopsis thaliana
DYCACCGACANHDNN
NNHDNTGTCGGTGRH		 Dap-seq
OMalley et al.(2016)
AT1G01250_col_a 		0.749 0.880
ERF023
M06561_2.00 		Arabidopsis thaliana
HHNHHDHCACCGACA
TGTCGGTGDHDDNDD		 Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a 		0.749 0.880
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.677 0.740
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.677 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN14075 AP2 56 107

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28211.m000132 Ricinus communis 28211.m000132 I
29983.m003158 Ricinus communis 29983.m003158 I
30174.m008805 Ricinus communis 30174.m008805 I
30190.m011329 Ricinus communis 30190.m011329 I
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I
SPL6 Arabidopsis thaliana AT1G69170 I
BGIOSGA016888 Oryza indica BGIOSGA016888 I
BGIOSGA024253 Oryza indica BGIOSGA024253 I
Bo2g062840 Brassica oleracea Bo2g062840 I
Bo5g127310 Brassica oleracea Bo5g127310 I
Bostr.28625s0189 Boechera stricta Bostr.28625s0189 I
Bra027265 Brassica rapa Bra027265 I
Bra038324 Brassica rapa Bra038324 I
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I
Carubv10020369m.g Capsella rubella Carubv10020369m.g I
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I
cassava31252.valid.m1 Manihot esculenta cassava31252.valid.m1 I
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I
Ca_10879 Cicer arietinum Ca_10879 I
Ca_16243 Cicer arietinum Ca_16243 I
Ca_24655 Cicer arietinum Ca_24655 I
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I
Cla002263 Citrullus lanatus Cla002263 I
Cla009788 Citrullus lanatus Cla009788 I
Cla017596 Citrullus lanatus Cla017596 I
Cla021411 Citrullus lanatus Cla021411 I
Cla023735 Citrullus lanatus Cla023735 I
Cucsa.192470 Cucumis sativus Cucsa.192470 I
Cucsa.196000 Cucumis sativus Cucsa.196000 I
Cucsa.259800 Cucumis sativus Cucsa.259800 I
Cucsa.272530 Cucumis sativus Cucsa.272530 I
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I
F775_02791 Aegilops tauschii F775_02791 I
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I
gene00196-v1.0-hybrid Fragaria vesca gene00196-v1.0-hybrid I
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I
GLYMA01G08056 Glycine max GLYMA01G08056 I
GLYMA02G13371 Glycine max GLYMA02G13371 I
GLYMA06G36140 Glycine max GLYMA06G36140 I
GLYMA07G19770 Glycine max GLYMA07G19770 I
GLYMA11G08905 Glycine max GLYMA11G08905 N
GLYMA11G16556 Glycine max GLYMA11G16556 I
GLYMA12G27330 Glycine max GLYMA12G27330 I
GLYMA13G31090 Glycine max GLYMA13G31090 I
GLYMA15G08270 Glycine max GLYMA15G08270 I
GLYMA20G00900 Glycine max GLYMA20G00900 I
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I
GRMZM2G067624 Zea mays GRMZM2G067624 N
GRMZM2G113779 Zea mays GRMZM2G113779 N
GRMZM2G138421 Zea mays GRMZM2G138421 I
GRMZM2G148467 Zea mays GRMZM2G148467 I
GRMZM2G156756 Zea mays GRMZM2G156756 I
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I
LjSGA_121222.1 Lotus japonicus LjSGA_121222.1 I
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I
LPERR04G17030 Leersia perrieri LPERR04G17030 I
Lus10013999.g Linum usitatissimum Lus10013999.g I
Lus10015421.g Linum usitatissimum Lus10015421.g I
Lus10018610.g Linum usitatissimum Lus10018610.g I
Lus10039846.g Linum usitatissimum Lus10039846.g I
MDP0000156994 Malus domestica MDP0000156994 I
MDP0000158607 Malus domestica MDP0000158607 I
MDP0000171877 Malus domestica MDP0000171877 I
MDP0000246046 Malus domestica MDP0000246046 I
MDP0000589558 Malus domestica MDP0000589558 I
MDP0000861601 Malus domestica MDP0000861601 I
MDP0000865739 Malus domestica MDP0000865739 I
mgf011616m Mimulus guttatus mgf011616m I
MLOC_13032 Hordeum vulgare MLOC_13032 I
MLOC_69667 Hordeum vulgare MLOC_69667 I
MTR_1g035010 Medicago truncatula MTR_1g035010 I
MTR_2g014200 Medicago truncatula MTR_2g014200 I
MTR_4g088555 Medicago truncatula MTR_4g088555 I
MTR_7g444860 Medicago truncatula MTR_7g444860 I
MTR_8g463140 Medicago truncatula MTR_8g463140 I
OB04G27960 Oryza brachyantha OB04G27960 I
OBART04G20940 Oryza barthii OBART04G20940 I
OBART07G15570 Oryza barthii OBART07G15570 I
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I
OMERI04G17360 Oryza meridionalis OMERI04G17360 I
OMERI07G12270 Oryza meridionalis OMERI07G12270 I
OMERI11G11920 Oryza meridionalis OMERI11G11920 I
ONIVA04G19190 Oryza nivara ONIVA04G19190 I
ONIVA07G14170 Oryza nivara ONIVA07G14170 I
OPUNC04G18620 Oryza punctata OPUNC04G18620 I
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I
SPL7 Oryza sativa OS04G0551500 I
SPL19 Oryza sativa OS11G0496600 I
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I
Pavir.J01500 Panicum virgatum Pavir.J01500 I
Pavir.J02262 Panicum virgatum Pavir.J02262 I
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I
PK22320.1 Cannabis sativa PK22320.1 D
PK26639.1 Cannabis sativa PK26639.1 I
Pm010075 Prunus mume Pm010075 I
Pm011381 Prunus mume Pm011381 I
Pm014154 Prunus mume Pm014154 I
Pm025028 Prunus mume Pm025028 I
Pm030597 Prunus mume Pm030597 I
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I
Sb01g002530 Sorghum bicolor Sb01g002530 I
Sb02g034180 Sorghum bicolor Sb02g034180 N
Sb06g024630 Sorghum bicolor Sb06g024630 I
Si001804m.g Setaria italica Si001804m.g I
Si010262m.g Setaria italica Si010262m.g I
Si032170m.g Setaria italica Si032170m.g I
Si034095m.g Setaria italica Si034095m.g I
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I
TCM_005620 Theobroma cacao TCM_005620 I
TCM_008150 Theobroma cacao TCM_008150 I
TCM_011483 Theobroma cacao TCM_011483 I
TCM_031595 Theobroma cacao TCM_031595 I
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I
Thhalv10021617m.g Eutrema salsugineum Thhalv10021617m.g I
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I
TRIUR3_23102 Triticum urartu TRIUR3_23102 I
SPL3 Vitis vinifera VIT_10s0003g00050 I
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I
VIT_19s0014g02350 Vitis vinifera VIT_19s0014g02350 I