3778_Multiple (Saccharomyces bayanus)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 3778_Multiple T013959_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.805 0.961
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.805 0.961
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.805 0.961
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.805 0.961
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.765 0.627
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.684 0.627
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.684 0.529
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.665 0.510
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3778_Multiple APSES 18 69

Links

Other APSES family TFs
Other Saccharomyces bayanus TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ULT1 Arabidopsis thaliana AT4G28190 N
Bo1g051270 Brassica oleracea Bo1g051270 N
Bo7g111950 Brassica oleracea Bo7g111950 N
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N
Bra024219 Brassica rapa Bra024219 N
Bra026276 Brassica rapa Bra026276 N
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N
Carubv10005638m.g Capsella rubella Carubv10005638m.g N
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N
Ca_19014 Cicer arietinum Ca_19014 N
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N
GLYMA06G45180 Glycine max GLYMA06G45180 N
GLYMA12G11800 Glycine max GLYMA12G11800 N
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N
Lus10018560.g Linum usitatissimum Lus10018560.g N
Lus10039791.g Linum usitatissimum Lus10039791.g N
MDP0000237588 Malus domestica MDP0000237588 N
MDP0000315130 Malus domestica MDP0000315130 N
MTR_2g090080 Medicago truncatula MTR_2g090080 N
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N
Pm015354 Prunus mume Pm015354 N
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N
TCM_007971 Theobroma cacao TCM_007971 N
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N