CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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E4F1
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000019235
T099533_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E4F1
M10255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6_01
0.825
0.990
E4F1
M10256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6
0.825
0.990
E4f1
M10339_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PHIAP3_03
0.817
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000025278
C2H2 ZF
192
214
YVCALCHKTFKTGSILKAHMVTH
ENSMMUP00000025278
C2H2 ZF
220
242
HECKLCGASFRTKGSLIRHHRRH
ENSMMUP00000025278
C2H2 ZF
248
269
YKCSKCGKSFRESGALTRHLKS
ENSMMUP00000025278
C2H2 ZF
435
457
HPCPQCSETFPTAATLEAHKRGH
ENSMMUP00000025278
C2H2 ZF
463
485
FACVQCGKAFPKAYLLKKHQEVH
ENSMMUP00000025278
C2H2 ZF
491
513
FRCGDCGKLYKTIAHVRGHRRVH
ENSMMUP00000025278
C2H2 ZF
519
541
YPCPECGKRYKTKNAQQVHFRTH
ENSMMUP00000025278
C2H2 ZF
547
569
HVCQFCSRGFREKGSLVRHVRHH
ENSMMUP00000025278
C2H2 ZF
575
596
FKCYKCGRGFAEHGTLNRHLRT
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29801.m003096
Ricinus communis
29801.m003096
I
29814.m000736
Ricinus communis
29814.m000736
I
29970.m000987
Ricinus communis
29970.m000987
I
30170.m013698
Ricinus communis
30170.m013698
I
30170.m013927
Ricinus communis
30170.m013927
I
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
Aquca_007_00776
Aquilegia coerulea
Aquca_007_00776
I
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
AtMYB70
Arabidopsis thaliana
AT2G23290
D
MYB1
Arabidopsis thaliana
AT3G09230
D
F3A4.140
Arabidopsis thaliana
AT3G50060
D
MYB109
Arabidopsis thaliana
AT3G55730
I
MYB73
Arabidopsis thaliana
AT4G37260
D
MYB44
Arabidopsis thaliana
AT5G67300
D
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
Bo1g004900
Brassica oleracea
Bo1g004900
I
Bo1g082480
Brassica oleracea
Bo1g082480
I
Bo2g167960
Brassica oleracea
Bo2g167960
I
Bo3g153550
Brassica oleracea
Bo3g153550
I
Bo4g025810
Brassica oleracea
Bo4g025810
I
Bo4g151410
Brassica oleracea
Bo4g151410
I
Bo7g063830
Brassica oleracea
Bo7g063830
I
Bo7g099180
Brassica oleracea
Bo7g099180
I
Bo7g118450
Brassica oleracea
Bo7g118450
I
Bo8g079430
Brassica oleracea
Bo8g079430
I
Bo8g090160
Brassica oleracea
Bo8g090160
I
Bostr.0568s0154
Boechera stricta
Bostr.0568s0154
I
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
Bostr.27895s0157
Boechera stricta
Bostr.27895s0157
I
Bostr.6864s0236
Boechera stricta
Bostr.6864s0236
I
Bostr.7867s1585
Boechera stricta
Bostr.7867s1585
I
Bra001323
Brassica rapa
Bra001323
I
Bra005006
Brassica rapa
Bra005006
I
Bra007186
Brassica rapa
Bra007186
I
Bra010593
Brassica rapa
Bra010593
I
Bra011749
Brassica rapa
Bra011749
I
Bra012149
Brassica rapa
Bra012149
I
Bra012910
Brassica rapa
Bra012910
I
Bra017813
Brassica rapa
Bra017813
I
Bra029990
Brassica rapa
Bra029990
I
Bra032176
Brassica rapa
Bra032176
I
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
Cagra.0342s0017
Capsella grandiflora
Cagra.0342s0017
I
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
Cagra.1232s0025
Capsella grandiflora
Cagra.1232s0025
I
Cagra.1549s0005
Capsella grandiflora
Cagra.1549s0005
I
Carubv10007638m.g
Capsella rubella
Carubv10007638m.g
I
Carubv10019440m.g
Capsella rubella
Carubv10019440m.g
I
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
Carubv10023692m.g
Capsella rubella
Carubv10023692m.g
I
Carubv10027659m.g
Capsella rubella
Carubv10027659m.g
I
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
cassava2215.valid.m1
Manihot esculenta
cassava2215.valid.m1
I
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
cassava43120.valid.m1
Manihot esculenta
cassava43120.valid.m1
I
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
Ca_01522
Cicer arietinum
Ca_01522
I
Ca_02182
Cicer arietinum
Ca_02182
I
Ca_12468
Cicer arietinum
Ca_12468
I
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
chr2.CM0250.240.nd
Lotus japonicus
chr2.CM0250.240.nd
I
chr5.CM0096.100.nc
Lotus japonicus
chr5.CM0096.100.nc
I
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
Ciclev10026107m.g
Citrus clementina
Ciclev10026107m.g
I
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
Cla006872
Citrullus lanatus
Cla006872
I
Cla014191
Citrullus lanatus
Cla014191
I
Cla020946
Citrullus lanatus
Cla020946
I
Cla021015
Citrullus lanatus
Cla021015
I
Cla022889
Citrullus lanatus
Cla022889
I
Cla022947
Citrullus lanatus
Cla022947
I
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
Cucsa.395890
Cucumis sativus
Cucsa.395890
I
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
evm.TU.supercontig_6.98
Carica papaya
evm.TU.supercontig_6.98
I
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
AtMYB70
Arabidopsis lyrata
fgenesh2_kg.4__260__AT2G23290.1
I
MYB77
Arabidopsis lyrata
fgenesh2_kg.5__1356__AT3G50060.1
I
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
gene24027-v1.0-hybrid
Fragaria vesca
gene24027-v1.0-hybrid
I
GLYMA01G39740
Glycine max
GLYMA01G39740
I
GLYMA04G03910
Glycine max
GLYMA04G03910
I
GLYMA04G04490
Glycine max
GLYMA04G04490
I
GLYMA05G21220
Glycine max
GLYMA05G21220
I
GLYMA06G04010
Glycine max
GLYMA06G04010
I
GLYMA09G12164
Glycine max
GLYMA09G12164
N
GLYMA11G05550
Glycine max
GLYMA11G05550
I
GLYMA14G09540
Glycine max
GLYMA14G09540
I
GLYMA17G35620
Glycine max
GLYMA17G35620
I
GLYMA17G36370
Glycine max
GLYMA17G36370
I
Gorai.002G009300
Gossypium raimondii
Gorai.002G009300
I
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
Gorai.007G055600
Gossypium raimondii
Gorai.007G055600
I
Gorai.007G218100
Gossypium raimondii
Gorai.007G218100
I
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
Gorai.009G276400
Gossypium raimondii
Gorai.009G276400
I
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
GRMZM2G050550
Zea mays
GRMZM2G050550
I
GRMZM2G078820
Zea mays
GRMZM2G078820
I
GRMZM2G087955
Zea mays
GRMZM2G087955
I
GRMZM2G145444
Zea mays
GRMZM2G145444
I
GRMZM5G803308
Zea mays
GRMZM5G803308
I
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
GSMUA_Achr8G25220_001
Musa acuminata
GSMUA_Achr8G25220_001
I
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
Lus10010260.g
Linum usitatissimum
Lus10010260.g
I
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
Lus10030336.g
Linum usitatissimum
Lus10030336.g
I
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
MDP0000196986
Malus domestica
MDP0000196986
I
MDP0000232454
Malus domestica
MDP0000232454
I
MDP0000275800
Malus domestica
MDP0000275800
I
MDP0000463846
Malus domestica
MDP0000463846
I
MDP0000477900
Malus domestica
MDP0000477900
I
MDP0000478512
Malus domestica
MDP0000478512
I
MDP0000480596
Malus domestica
MDP0000480596
I
MDP0000641708
Malus domestica
MDP0000641708
I
MDP0000784297
Malus domestica
MDP0000784297
I
MDP0000823270
Malus domestica
MDP0000823270
I
mgf002573m
Mimulus guttatus
mgf002573m
I
mgf003084m
Mimulus guttatus
mgf003084m
I
mgf006151m
Mimulus guttatus
mgf006151m
I
mgf014089m
Mimulus guttatus
mgf014089m
I
mgf020432m
Mimulus guttatus
mgf020432m
I
mgf023922m
Mimulus guttatus
mgf023922m
I
mgf025567m
Mimulus guttatus
mgf025567m
I
MLOC_64817
Hordeum vulgare
MLOC_64817
I
MLOC_7426
Hordeum vulgare
MLOC_7426
I
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
MTR_5g016510
Medicago truncatula
MTR_5g016510
I
OB09G10200
Oryza brachyantha
OB09G10200
I
OBART09G00310
Oryza barthii
OBART09G00310
I
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
orange1.1g021071m.g
Citrus sinensis
orange1.1g021071m.g
I
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
OS02G0187700
Oryza sativa
OS02G0187700
D
OS06G0637500
Oryza sativa
OS06G0637500
I
OS09G0106700
Oryza sativa
OS09G0106700
I
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
PGSC0003DMG400003316
Solanum tuberosum
PGSC0003DMG400003316
I
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
PGSC0003DMG400024983
Solanum tuberosum
PGSC0003DMG400024983
I
PK01153.1
Cannabis sativa
PK01153.1
I
PK17282.1
Cannabis sativa
PK17282.1
I
PK28565.1
Cannabis sativa
PK28565.1
D
PK29071.1
Cannabis sativa
PK29071.1
I
Pm005220
Prunus mume
Pm005220
I
Pm005332
Prunus mume
Pm005332
I
Pm018951
Prunus mume
Pm018951
I
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
PRUPE_ppa008450mg
Prunus persica
PRUPE_ppa008450mg
I
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
SapurV1A.0167s0310
Salix purpurea
SapurV1A.0167s0310
I
SapurV1A.0339s0020
Salix purpurea
SapurV1A.0339s0020
I
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
Sb02g013010
Sorghum bicolor
Sb02g013010
I
Sb04g005940
Sorghum bicolor
Sb04g005940
I
Sb10g024950
Sorghum bicolor
Sb10g024950
I
ATMYBR1
Arabidopsis lyrata
scaffold_803378.1
I
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
Si006938m.g
Setaria italica
Si006938m.g
I
Si017917m.g
Setaria italica
Si017917m.g
I
Si032789m.g
Setaria italica
Si032789m.g
I
Solyc02g092930.1
Solanum lycopersicum
Solyc02g092930.1
I
Solyc04g078420.1
Solanum lycopersicum
Solyc04g078420.1
I
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
TCM_000696
Theobroma cacao
TCM_000696
I
TCM_007138
Theobroma cacao
TCM_007138
I
TCM_033907
Theobroma cacao
TCM_033907
I
TCM_042474
Theobroma cacao
TCM_042474
I
Thhalv10000438m.g
Eutrema salsugineum
Thhalv10000438m.g
I
Thhalv10004676m.g
Eutrema salsugineum
Thhalv10004676m.g
I
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
Thhalv10010581m.g
Eutrema salsugineum
Thhalv10010581m.g
I
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
Thhalv10025742m.g
Eutrema salsugineum
Thhalv10025742m.g
I
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
VIT_07s0129g01050
Vitis vinifera
VIT_07s0129g01050
I
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
VIT_18s0001g09850
Vitis vinifera
VIT_18s0001g09850
I
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I