Gorai.007G177300 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.007G177300 T143037_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G177300.1 C2H2 ZF 245 266
Gorai.007G177300.1 C2H2 ZF 265 291

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.774
30055.m001542 Ricinus communis 30055.m001542 N 0.778
30169.m006417 Ricinus communis 30169.m006417 N 0.758
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.774
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.764
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.784
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.784
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.764
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.784
WIP6 Arabidopsis thaliana AT1G13290 N 0.758
WIP2 Arabidopsis thaliana AT3G57670 N 0.774
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.000
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.000
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.000
Bo4g111000 Brassica oleracea Bo4g111000 N 0.774
Bo5g015200 Brassica oleracea Bo5g015200 N 0.758
Bo5g081360 Brassica oleracea Bo5g081360 N 0.791
Bo6g073120 Brassica oleracea Bo6g073120 N 0.774
Bo8g092070 Brassica oleracea Bo8g092070 N 0.774
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.758
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.774
Bra003295 Brassica rapa Bra003295 N 0.774
Bra007346 Brassica rapa Bra007346 N 0.772
Bra014612 Brassica rapa Bra014612 N 0.774
Bra019822 Brassica rapa Bra019822 N 0.758
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.000
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.000
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.000
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.781
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.774
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.758
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.758
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.774
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.778
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.778
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.000
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.774
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.774
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.764
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.764
Ca_07051 Cicer arietinum Ca_07051 N 0.778
Ca_07269 Cicer arietinum Ca_07269 N 0.774
Ca_08435 Cicer arietinum Ca_08435 N 0.764
Ca_16482 Cicer arietinum Ca_16482 N 0.773
Ca_21713 Cicer arietinum Ca_21713 N 0.758
Ca_24699 Cicer arietinum Ca_24699 N 0.764
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.774
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.764
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.772
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.774
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.767
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.778
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.000
Cla002714 Citrullus lanatus Cla002714 N 0.764
Cla008187 Citrullus lanatus Cla008187 N 0.774
Cla008675 Citrullus lanatus Cla008675 N 0.767
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.774
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.764
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.774
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.774
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.764
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.778
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.774
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.758
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.778
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.764
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.774
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.758
F775_14972 Aegilops tauschii F775_14972 N 0.781
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.774
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.000
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.774
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.767
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.778
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.764
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.764
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.774
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.758
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.778
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.778
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.778
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.778
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.774
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.758
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.778
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.774
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.774
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.778
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.767
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.764
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.758
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.000
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.758
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.781
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.000
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.000
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.000
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.000
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.764
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.758
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.000
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.000
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.764
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.000
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.774
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.767
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.758
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.784
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.000
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.000
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.778
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.778
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.764
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.000
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.000
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.764
MDP0000131949 Malus domestica MDP0000131949 N 0.778
MDP0000300013 Malus domestica MDP0000300013 N 0.778
MDP0000303483 Malus domestica MDP0000303483 N 0.764
MDP0000403797 Malus domestica MDP0000403797 N 0.767
MDP0000580545 Malus domestica MDP0000580545 N 0.767
MDP0000601705 Malus domestica MDP0000601705 N 0.774
MDP0000899280 Malus domestica MDP0000899280 N 0.000
mgf019910m Mimulus guttatus mgf019910m N 0.767
mgf022319m Mimulus guttatus mgf022319m N 0.797
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.781
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.000
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.758
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.764
OB05G26090 Oryza brachyantha OB05G26090 N 0.000
OB06G28740 Oryza brachyantha OB06G28740 N 0.000
OBART02G07320 Oryza barthii OBART02G07320 N 0.000
OBART06G20890 Oryza barthii OBART06G20890 N 0.758
OBART09G03640 Oryza barthii OBART09G03640 N 0.000
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.000
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.000
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.000
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.000
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.000
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.000
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.000
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.000
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.000
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.000
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.000
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.000
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.767
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.778
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.774
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.000
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.000
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.000
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.000
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.000
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.000
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.000
OS02G0196100 Oryza sativa OS02G0196100 N 0.000
OS06G0612300 Oryza sativa OS06G0612300 N 0.000
OS09G0307400 Oryza sativa OS09G0307400 N 0.000
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.781
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.000
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.000
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.784
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.767
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.774
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.764
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.797
PK03705.1 Cannabis sativa PK03705.1 N 0.774
PK05257.1 Cannabis sativa PK05257.1 N 0.772
Pm000471 Prunus mume Pm000471 N 0.767
Pm001374 Prunus mume Pm001374 N 0.778
Pm025853 Prunus mume Pm025853 N 0.774
Pm029018 Prunus mume Pm029018 N 0.764
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.758
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.778
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.778
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.764
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.774
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.774
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.764
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.778
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.767
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.758
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.774
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.778
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.778
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.781
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.000
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.758
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.758
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.758
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.758
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.764
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.764
Si006616m.g Setaria italica Si006616m.g N 0.000
Si029897m.g Setaria italica Si029897m.g N 0.781
Si030360m.g Setaria italica Si030360m.g N 0.000
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.764
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.774
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.767
TCM_011858 Theobroma cacao TCM_011858 N 0.764
TCM_024788 Theobroma cacao TCM_024788 N 0.774
TCM_040610 Theobroma cacao TCM_040610 N 0.758
TCM_041441 Theobroma cacao TCM_041441 N 0.778
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.774
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.758
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.000
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.781
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.781
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.000
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.758
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.781
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.758
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.781
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.000
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.764
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.778
NTT Vitis vinifera VIT_08s0007g08070 N 0.774