SapurV1A.0033s0440 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0033s0440 T143450_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.820 0.891
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.820 0.891
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.795 0.826
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.792 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.769 0.674
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.769 0.674
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.769 0.674
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.768 0.652
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.760 0.674
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.760 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0033s0440.1.p C2H2 ZF 229 251
SapurV1A.0033s0440.1.p C2H2 ZF 283 305

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.000
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.000
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.000
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.000
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.000
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.000
OB10G10530 Oryza brachyantha OB10G10530 N 0.000
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.000
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.000
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.000
OPUNC10G00600 Oryza punctata OPUNC10G00600 N 0.000
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.000
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.000
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.000
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.000
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.000
Si029480m.g Setaria italica Si029480m.g N 0.000
Si036337m.g Setaria italica Si036337m.g N 0.000
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.000
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.000