AFUN007280 (Anopheles funestus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 AFUN007280 T166368_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.855 0.855
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.855 0.855
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.771 0.771
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.771 0.771
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.771 0.771
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.771 0.771
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.771 0.771
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.771 0.771
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.771 0.771
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.771 0.771
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.771 0.771
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.771 0.771
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.771 0.771
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.771 0.771
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN007280-PA CSL 84 215

Links

Other CSL family TFs
Other Anopheles funestus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001628 Ricinus communis 29900.m001628 I 0.000
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.000
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.000
Bo6g075950 Brassica oleracea Bo6g075950 I 0.000
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.000
Bra003346 Brassica rapa Bra003346 I 0.000
Bra007407 Brassica rapa Bra007407 I 0.000
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.000
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
Ca_00394 Cicer arietinum Ca_00394 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.000
Cla002288 Citrullus lanatus Cla002288 I 0.000
Cla009854 Citrullus lanatus Cla009854 I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.000
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.000
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.000
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
mgf001239m Mimulus guttatus mgf001239m N 0.000
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
PGSC0003DMG400020421 Solanum tuberosum PGSC0003DMG400020421 N 0.000
PK27986.1 Cannabis sativa PK27986.1 I 0.000
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.000
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.000
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.000
Solyc07g055100.2 Solanum lycopersicum Solyc07g055100.2 N 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
TCM_029695 Theobroma cacao TCM_029695 I 0.000
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000