Cucsa.143220 (Cucumis sativus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Cucsa.143220 T175305_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.842 0.842
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.842 0.842
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.810 0.810
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.737 0.737
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.717 0.717
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.709 0.709
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.709 0.709
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.143220.1 EIN3 40 287

Links

Other EIN3 family TFs
Other Cucumis sativus TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29708.m000185 Ricinus communis 29708.m000185 I 0.704
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.722
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.703
EIL1 Arabidopsis thaliana AT2G27050 D
EIN3 Arabidopsis thaliana AT3G20770 D 0.711
BGIOSGA012535 Oryza indica BGIOSGA012535 I
BGIOSGA023694 Oryza indica BGIOSGA023694 I
Bo1g108650 Brassica oleracea Bo1g108650 I
Bo3g041690 Brassica oleracea Bo3g041690 I
Bo3g076180 Brassica oleracea Bo3g076180 I
Bo5g106280 Brassica oleracea Bo5g106280 I
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.711
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I
Bra000528 Brassica rapa Bra000528 I
Bra001802 Brassica rapa Bra001802 I
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.704
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.711
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.711
Carubv10022879m.g Capsella rubella Carubv10022879m.g I
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.715
Ca_07534 Cicer arietinum Ca_07534 I
Ca_10236 Cicer arietinum Ca_10236 I
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.709
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.707
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.703
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.703
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.707
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.707
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.720
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.709
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.741
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.740
F775_28545 Aegilops tauschii F775_28545 I
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.720
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.700
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.706
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.707
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.715
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.700
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.707
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.720
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.707
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.707
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.711
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I
GRMZM2G003558 Zea mays GRMZM2G003558 I
GRMZM2G033570 Zea mays GRMZM2G033570 I
GRMZM2G151811 Zea mays GRMZM2G151811 I
GRMZM2G317584 Zea mays GRMZM2G317584 I
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.704
LPERR07G23570 Leersia perrieri LPERR07G23570 I
MDP0000202831 Malus domestica MDP0000202831 I 0.707
MDP0000212881 Malus domestica MDP0000212881 I
MDP0000306498 Malus domestica MDP0000306498 I
MDP0000564884 Malus domestica MDP0000564884 I
mgf012394m Mimulus guttatus mgf012394m I
MLOC_14619 Hordeum vulgare MLOC_14619 I
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.707
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.704
OB07G32250 Oryza brachyantha OB07G32250 I
OBART07G26760 Oryza barthii OBART07G26760 I
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I
OLONG_004360 Oryza longistaminata OLONG_004360 I
OMERI03G14140 Oryza meridionalis OMERI03G14140 I
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
OMERI07G23380 Oryza meridionalis OMERI07G23380 I
ONIVA03G16680 Oryza nivara ONIVA03G16680 I
ONIVA07G26490 Oryza nivara ONIVA07G26490 I
OPUNC03G15240 Oryza punctata OPUNC03G15240 I
OPUNC07G25150 Oryza punctata OPUNC07G25150 I
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.703
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.703
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.707
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I
OS03G0324200 Oryza sativa OS03G0324200 I
OS03G0324300 Oryza sativa OS03G0324300 I
OS07G0685700 Oryza sativa OS07G0685700 I
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.713
Pavir.J01001 Panicum virgatum Pavir.J01001 I
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.715
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.703
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.703
PK01239.1 Cannabis sativa PK01239.1 I
PK13351.1 Cannabis sativa PK13351.1 I 0.711
Pm017009 Prunus mume Pm017009 I
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.707
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.711
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.717
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.707
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.715
Sb01g036740 Sorghum bicolor Sb01g036740 I
Si029213m.g Setaria italica Si029213m.g I
Si034616m.g Setaria italica Si034616m.g I 0.701
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.703
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.703
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.715
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I
TCM_042022 Theobroma cacao TCM_042022 I 0.724
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.707
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.739
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.703