CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA25156
(
Drosophila pseudoobscura
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
FBgn0246538
T187601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.842
0.930
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.753
0.709
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.710
0.674
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.710
0.674
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0278843
Forkhead
136
227
KPAYSYSCLIALALKNSRAGSLPVLEIYSFLCQHYPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRNGCRWALNPERITKMDEEVQ
Links
Other
Forkhead
family TFs
Other
Drosophila pseudoobscura
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28211.m000132
Ricinus communis
28211.m000132
I
29889.m003388
Ricinus communis
29889.m003388
I
29983.m003158
Ricinus communis
29983.m003158
I
30076.m004574
Ricinus communis
30076.m004574
I
30174.m008805
Ricinus communis
30174.m008805
I
30190.m011329
Ricinus communis
30190.m011329
I
AMTR_s00019p00235390
Amborella trichopoda
AMTR_s00019p00235390
I
AMTR_s00106p00142470
Amborella trichopoda
AMTR_s00106p00142470
I
Aquca_033_00055
Aquilegia coerulea
Aquca_033_00055
I
Aquca_035_00165
Aquilegia coerulea
Aquca_035_00165
I
SPL4
Arabidopsis thaliana
AT1G53160
D
SPL3
Arabidopsis thaliana
AT2G33810
D
SPL12
Arabidopsis thaliana
AT3G60030
D
BGIOSGA016888
Oryza indica
BGIOSGA016888
I
BGIOSGA024253
Oryza indica
BGIOSGA024253
I
Bo3g027460
Brassica oleracea
Bo3g027460
I
Bo4g005730
Brassica oleracea
Bo4g005730
I
Bo4g042390
Brassica oleracea
Bo4g042390
I
Bo6g029290
Brassica oleracea
Bo6g029290
I
Bostr.0124s0106
Boechera stricta
Bostr.0124s0106
I
Bostr.23794s0714
Boechera stricta
Bostr.23794s0714
I
Bostr.25993s0059
Boechera stricta
Bostr.25993s0059
I
Bostr.29344s0010
Boechera stricta
Bostr.29344s0010
I
Bra005470
Brassica rapa
Bra005470
I
Bra021880
Brassica rapa
Bra021880
I
Bra022954
Brassica rapa
Bra022954
I
Bra038101
Brassica rapa
Bra038101
I
Bra041037
Brassica rapa
Bra041037
I
BRADI1G26720
Brachypodium distachyon
BRADI1G26720
I
Cagra.1195s0023
Capsella grandiflora
Cagra.1195s0023
I
Cagra.1472s0017
Capsella grandiflora
Cagra.1472s0017
I
Cagra.16630s0008
Capsella grandiflora
Cagra.16630s0008
I
Cagra.3527s0045
Capsella grandiflora
Cagra.3527s0045
I
Carubv10010422m.g
Capsella rubella
Carubv10010422m.g
I
Carubv10024311m.g
Capsella rubella
Carubv10024311m.g
I
cassava13944.valid.m1
Manihot esculenta
cassava13944.valid.m1
I
cassava17741.valid.m1
Manihot esculenta
cassava17741.valid.m1
I
cassava29736.valid.m1
Manihot esculenta
cassava29736.valid.m1
I
cassava31252.valid.m1
Manihot esculenta
cassava31252.valid.m1
I
cassava36085.valid.m1
Manihot esculenta
cassava36085.valid.m1
I
cassava37839.valid.m1
Manihot esculenta
cassava37839.valid.m1
I
cassava46941.m1
Manihot esculenta
cassava46941.m1
I
Ca_00320
Cicer arietinum
Ca_00320
I
Ca_01036
Cicer arietinum
Ca_01036
I
Ca_03548
Cicer arietinum
Ca_03548
I
Ca_10879
Cicer arietinum
Ca_10879
I
Ca_16243
Cicer arietinum
Ca_16243
I
Ca_24655
Cicer arietinum
Ca_24655
I
chr1.CM0122.330.nc
Lotus japonicus
chr1.CM0122.330.nc
I
chr3.CM0160.520.nc
Lotus japonicus
chr3.CM0160.520.nc
I
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
chr5.CM0158.110.nc
Lotus japonicus
chr5.CM0158.110.nc
I
chr6.CM0114.270.nc
Lotus japonicus
chr6.CM0114.270.nc
I
Ciclev10004227m.g
Citrus clementina
Ciclev10004227m.g
I
Ciclev10009879m.g
Citrus clementina
Ciclev10009879m.g
I
Ciclev10016841m.g
Citrus clementina
Ciclev10016841m.g
I
Ciclev10017104m.g
Citrus clementina
Ciclev10017104m.g
I
Ciclev10018697m.g
Citrus clementina
Ciclev10018697m.g
I
Ciclev10020532m.g
Citrus clementina
Ciclev10020532m.g
I
Ciclev10031270m.g
Citrus clementina
Ciclev10031270m.g
I
Cla002263
Citrullus lanatus
Cla002263
I
Cla009788
Citrullus lanatus
Cla009788
I
Cla020006
Citrullus lanatus
Cla020006
I
Cla021411
Citrullus lanatus
Cla021411
I
Cla023735
Citrullus lanatus
Cla023735
I
Cucsa.046310
Cucumis sativus
Cucsa.046310
N
Cucsa.126820
Cucumis sativus
Cucsa.126820
I
Cucsa.196000
Cucumis sativus
Cucsa.196000
I
Cucsa.259800
Cucumis sativus
Cucsa.259800
I
Cucsa.272530
Cucumis sativus
Cucsa.272530
I
estExt_fgenesh1_pg.C_1940032
Physcomitrella patens
estExt_fgenesh1_pg.C_1940032
I
Eucgr.A01019
Eucalyptus grandis
Eucgr.A01019
I
Eucgr.D02505
Eucalyptus grandis
Eucgr.D02505
I
Eucgr.E03260
Eucalyptus grandis
Eucgr.E03260
I
Eucgr.F03303
Eucalyptus grandis
Eucgr.F03303
I
Eucgr.K01046
Eucalyptus grandis
Eucgr.K01046
I
evm.TU.supercontig_149.2
Carica papaya
evm.TU.supercontig_149.2
I
evm.TU.supercontig_27.40
Carica papaya
evm.TU.supercontig_27.40
I
evm.TU.supercontig_80.88
Carica papaya
evm.TU.supercontig_80.88
I
F775_02791
Aegilops tauschii
F775_02791
I
fgenesh1_pg.scaffold_337000032
Physcomitrella patens
fgenesh1_pg.scaffold_337000032
I
SPL4
Arabidopsis lyrata
fgenesh2_kg.1__4389__AT1G53160.2
I
SPL3
Arabidopsis lyrata
fgenesh2_kg.4__1394__AT2G33810.1
I
gene00196-v1.0-hybrid
Fragaria vesca
gene00196-v1.0-hybrid
I
gene17738-v1.0-hybrid
Fragaria vesca
gene17738-v1.0-hybrid
I
gene29726-v1.0-hybrid
Fragaria vesca
gene29726-v1.0-hybrid
I
GLYMA01G08056
Glycine max
GLYMA01G08056
I
GLYMA01G15134
Glycine max
GLYMA01G15134
I
GLYMA02G01160
Glycine max
GLYMA02G01160
I
GLYMA02G13371
Glycine max
GLYMA02G13371
I
GLYMA03G27195
Glycine max
GLYMA03G27195
I
GLYMA06G36140
Glycine max
GLYMA06G36140
I
GLYMA07G14641
Glycine max
GLYMA07G14641
I
GLYMA07G31880
Glycine max
GLYMA07G31880
N
GLYMA09G09790
Glycine max
GLYMA09G09790
I
GLYMA10G01211
Glycine max
GLYMA10G01211
I
GLYMA11G16556
Glycine max
GLYMA11G16556
I
GLYMA12G27330
Glycine max
GLYMA12G27330
I
GLYMA13G24590
Glycine max
GLYMA13G24590
N
GLYMA13G31090
Glycine max
GLYMA13G31090
I
GLYMA15G08270
Glycine max
GLYMA15G08270
I
GLYMA15G21860
Glycine max
GLYMA15G21860
I
GLYMA17G04400
Glycine max
GLYMA17G04400
I
Gorai.004G047200
Gossypium raimondii
Gorai.004G047200
I
Gorai.007G087900
Gossypium raimondii
Gorai.007G087900
I
Gorai.007G116100
Gossypium raimondii
Gorai.007G116100
I
Gorai.008G107300
Gossypium raimondii
Gorai.008G107300
I
Gorai.008G135700
Gossypium raimondii
Gorai.008G135700
I
Gorai.011G029400
Gossypium raimondii
Gorai.011G029400
I
Gorai.013G169800
Gossypium raimondii
Gorai.013G169800
I
GRMZM2G148467
Zea mays
GRMZM2G148467
I
GRMZM2G156756
Zea mays
GRMZM2G156756
I
GSMUA_Achr1G08440_001
Musa acuminata
GSMUA_Achr1G08440_001
I
GSMUA_Achr2G01820_001
Musa acuminata
GSMUA_Achr2G01820_001
I
GSMUA_Achr2G03070_001
Musa acuminata
GSMUA_Achr2G03070_001
I
GSMUA_Achr3G24520_001
Musa acuminata
GSMUA_Achr3G24520_001
I
GSMUA_Achr4G23650_001
Musa acuminata
GSMUA_Achr4G23650_001
I
GSMUA_Achr4G26940_001
Musa acuminata
GSMUA_Achr4G26940_001
I
GSMUA_Achr5G13440_001
Musa acuminata
GSMUA_Achr5G13440_001
I
LPERR04G17030
Leersia perrieri
LPERR04G17030
I
Lus10004523.g
Linum usitatissimum
Lus10004523.g
I
Lus10005548.g
Linum usitatissimum
Lus10005548.g
I
Lus10009984.g
Linum usitatissimum
Lus10009984.g
I
Lus10010071.g
Linum usitatissimum
Lus10010071.g
I
Lus10013999.g
Linum usitatissimum
Lus10013999.g
I
Lus10015421.g
Linum usitatissimum
Lus10015421.g
I
Lus10018610.g
Linum usitatissimum
Lus10018610.g
I
Lus10039846.g
Linum usitatissimum
Lus10039846.g
I
MDP0000156994
Malus domestica
MDP0000156994
I
MDP0000158607
Malus domestica
MDP0000158607
I
MDP0000180408
Malus domestica
MDP0000180408
I
MDP0000262141
Malus domestica
MDP0000262141
I
MDP0000589558
Malus domestica
MDP0000589558
I
MDP0000861601
Malus domestica
MDP0000861601
I
MDP0000865739
Malus domestica
MDP0000865739
I
mgf000195m
Mimulus guttatus
mgf000195m
I
mgf001295m
Mimulus guttatus
mgf001295m
I
mgf009459m
Mimulus guttatus
mgf009459m
I
mgf011616m
Mimulus guttatus
mgf011616m
I
mgf016414m
Mimulus guttatus
mgf016414m
I
mgf017351m
Mimulus guttatus
mgf017351m
I
mgf025134m
Mimulus guttatus
mgf025134m
I
MLOC_13032
Hordeum vulgare
MLOC_13032
I
MLOC_69667
Hordeum vulgare
MLOC_69667
I
MTR_1g086250
Medicago truncatula
MTR_1g086250
I
MTR_2g014200
Medicago truncatula
MTR_2g014200
I
MTR_4g088555
Medicago truncatula
MTR_4g088555
I
MTR_5g046670
Medicago truncatula
MTR_5g046670
I
MTR_7g110320
Medicago truncatula
MTR_7g110320
I
MTR_7g444860
Medicago truncatula
MTR_7g444860
I
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
OB04G27960
Oryza brachyantha
OB04G27960
I
OB08G27190
Oryza brachyantha
OB08G27190
I
OBART04G20940
Oryza barthii
OBART04G20940
I
OBART07G15570
Oryza barthii
OBART07G15570
I
OGLUM04G20870
Oryza glumaepatula
OGLUM04G20870
I
OGLUM07G15250
Oryza glumaepatula
OGLUM07G15250
I
OMERI04G17360
Oryza meridionalis
OMERI04G17360
I
OMERI07G12270
Oryza meridionalis
OMERI07G12270
I
ONIVA04G19190
Oryza nivara
ONIVA04G19190
I
ONIVA07G14170
Oryza nivara
ONIVA07G14170
I
OPUNC04G18620
Oryza punctata
OPUNC04G18620
I
orange1.1g001971m.g
Citrus sinensis
orange1.1g001971m.g
I
orange1.1g009653m.g
Citrus sinensis
orange1.1g009653m.g
I
orange1.1g017256m.g
Citrus sinensis
orange1.1g017256m.g
I
orange1.1g029650m.g
Citrus sinensis
orange1.1g029650m.g
I
orange1.1g032310m.g
Citrus sinensis
orange1.1g032310m.g
I
orange1.1g032937m.g
Citrus sinensis
orange1.1g032937m.g
I
ORGLA04G0180000
Oryza glaberrima
ORGLA04G0180000
I
ORUFI04G22540
Oryza rufipogon
ORUFI04G22540
I
ORUFI07G16070
Oryza rufipogon
ORUFI07G16070
I
SPL7
Oryza sativa
OS04G0551500
I
Pavir.Ga01083
Panicum virgatum
Pavir.Ga01083
I
Pavir.Gb01121
Panicum virgatum
Pavir.Gb01121
I
Pavir.Ia00235
Panicum virgatum
Pavir.Ia00235
I
Pavir.J01500
Panicum virgatum
Pavir.J01500
I
PGSC0003DMG400005196
Solanum tuberosum
PGSC0003DMG400005196
I
PGSC0003DMG400022824
Solanum tuberosum
PGSC0003DMG400022824
I
PGSC0003DMG400023260
Solanum tuberosum
PGSC0003DMG400023260
I
PGSC0003DMG400032817
Solanum tuberosum
PGSC0003DMG400032817
I
PGSC0003DMG401029709
Solanum tuberosum
PGSC0003DMG401029709
I
PK06791.1
Cannabis sativa
PK06791.1
D
PK22320.1
Cannabis sativa
PK22320.1
D
Pm010075
Prunus mume
Pm010075
I
Pm011381
Prunus mume
Pm011381
I
Pm014154
Prunus mume
Pm014154
I
Pm017777
Prunus mume
Pm017777
I
Pm017778
Prunus mume
Pm017778
I
POPTR_0001s13630
Populus trichocarpa
POPTR_0001s13630
I
POPTR_0001s40870
Populus trichocarpa
POPTR_0001s40870
I
POPTR_0002s14330
Populus trichocarpa
POPTR_0002s14330
I
POPTR_0002s18970
Populus trichocarpa
POPTR_0002s18970
I
POPTR_0004s04630
Populus trichocarpa
POPTR_0004s04630
I
POPTR_0007s01030
Populus trichocarpa
POPTR_0007s01030
I
POPTR_0011s11770
Populus trichocarpa
POPTR_0011s11770
I
POPTR_0014s05690
Populus trichocarpa
POPTR_0014s05690
I
POPTR_0014s10960
Populus trichocarpa
POPTR_0014s10960
I
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
PRUPE_ppa008560mg
Prunus persica
PRUPE_ppa008560mg
I
PRUPE_ppa011968mg
Prunus persica
PRUPE_ppa011968mg
I
PRUPE_ppa012607mg
Prunus persica
PRUPE_ppa012607mg
I
PRUPE_ppa022739mg
Prunus persica
PRUPE_ppa022739mg
I
PRUPE_ppa024285mg
Prunus persica
PRUPE_ppa024285mg
I
SapurV1A.0012s0510
Salix purpurea
SapurV1A.0012s0510
I
SapurV1A.0014s0380
Salix purpurea
SapurV1A.0014s0380
I
SapurV1A.0032s0360
Salix purpurea
SapurV1A.0032s0360
I
SapurV1A.0033s0320
Salix purpurea
SapurV1A.0033s0320
I
SapurV1A.0072s0370
Salix purpurea
SapurV1A.0072s0370
I
SapurV1A.0156s0200
Salix purpurea
SapurV1A.0156s0200
I
SapurV1A.0294s0270
Salix purpurea
SapurV1A.0294s0270
I
SapurV1A.0382s0120
Salix purpurea
SapurV1A.0382s0120
I
SapurV1A.1460s0110
Salix purpurea
SapurV1A.1460s0110
I
Sb01g002530
Sorghum bicolor
Sb01g002530
I
Sb06g024630
Sorghum bicolor
Sb06g024630
I
SPL12
Arabidopsis lyrata
scaffold_503227.1
I
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
Si010262m.g
Setaria italica
Si010262m.g
I
Si032170m.g
Setaria italica
Si032170m.g
I
Si034095m.g
Setaria italica
Si034095m.g
I
Solyc01g068100.2
Solanum lycopersicum
Solyc01g068100.2
I
Solyc02g077920.2
Solanum lycopersicum
Solyc02g077920.2
I
Solyc07g053810.2
Solanum lycopersicum
Solyc07g053810.2
I
Solyc10g009080.2
Solanum lycopersicum
Solyc10g009080.2
I
Solyc12g038520.1
Solanum lycopersicum
Solyc12g038520.1
I
TCM_004922
Theobroma cacao
TCM_004922
I
TCM_005620
Theobroma cacao
TCM_005620
I
TCM_008150
Theobroma cacao
TCM_008150
I
TCM_021482
Theobroma cacao
TCM_021482
I
TCM_029832
Theobroma cacao
TCM_029832
I
TCM_031595
Theobroma cacao
TCM_031595
I
Thhalv10001295m.g
Eutrema salsugineum
Thhalv10001295m.g
I
Thhalv10011728m.g
Eutrema salsugineum
Thhalv10011728m.g
I
Thhalv10017406m.g
Eutrema salsugineum
Thhalv10017406m.g
I
Thhalv10018065m.g
Eutrema salsugineum
Thhalv10018065m.g
I
Traes_2AL_B45245746
Triticum aestivum
Traes_2AL_B45245746
I
Traes_2AS_C2A4AFE6F
Triticum aestivum
Traes_2AS_C2A4AFE6F
I
Traes_2BL_69E6AB6D1
Triticum aestivum
Traes_2BL_69E6AB6D1
I
Traes_2BS_186EA570A
Triticum aestivum
Traes_2BS_186EA570A
I
TRIUR3_23102
Triticum urartu
TRIUR3_23102
I
VIT_04s0210g00170
Vitis vinifera
VIT_04s0210g00170
N
VIT_05s0020g00700
Vitis vinifera
VIT_05s0020g00700
I
VIT_07s0005g02260
Vitis vinifera
VIT_07s0005g02260
I
SPL3
Vitis vinifera
VIT_10s0003g00050
I
VIT_12s0028g03350
Vitis vinifera
VIT_12s0028g03350
I
VIT_15s0021g02290
Vitis vinifera
VIT_15s0021g02290
I
VIT_19s0014g02350
Vitis vinifera
VIT_19s0014g02350
I