CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf025772m
(
Mimulus guttatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
mgf025772m
T202228_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf025772m
GRAS
190
552
LVHTLMACAEAVQKENFKLAEALVKKIGSLAVSQPGSMRKVATYFAEALARRIYRLYPTNPQESAFTDLLETHFYETCPYLKFAHFTANQAILEAFAGQNRVHVIDLGIKQGMQWPALLQALALRPGGPPRFRLTGVGPSSHDHLNEVGYKLAQLAQTINIEFEYKGVVANSLADLDASMFDVKEGEAVAVNSIFELHQLLAKTGAIEKVLKFVRELKPAILTVVEQEANHNGAVFLDRFNESLHYYSTLYDSLESCGGGGGDGAVSDQDKVMSEVYLGRQICNVVACEGVERVERHETLGQWRARLGWAGFGPVHLGSNAYKQASMLLALFAGGGGYVVEENNGCLMLGWHTRPLIATSAWK
Links
Other
GRAS
family TFs
Other
Mimulus guttatus
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28677.m000055
Ricinus communis
28677.m000055
N
0.708
29692.m000540
Ricinus communis
29692.m000540
N
0.753
AMTR_s00010p00148880
Amborella trichopoda
AMTR_s00010p00148880
N
0.726
Aquca_091_00032
Aquilegia coerulea
Aquca_091_00032
N
0.706
GAI
Arabidopsis thaliana
AT1G14920
N
0.714
RGA
Arabidopsis thaliana
AT2G01570
N
0.712
SLR1
Oryza indica
BGIOSGA013420
N
0.713
Bo7g078550
Brassica oleracea
Bo7g078550
N
0.721
Bostr.7128s0107
Boechera stricta
Bostr.7128s0107
N
0.717
Bostr.7903s0021
Boechera stricta
Bostr.7903s0021
N
0.721
Bra024875
Brassica rapa
Bra024875
N
0.723
Cagra.2235s0013
Capsella grandiflora
Cagra.2235s0013
N
0.721
Cagra.3501s0003
Capsella grandiflora
Cagra.3501s0003
N
0.720
Carubv10008833m.g
Capsella rubella
Carubv10008833m.g
N
0.720
cassava14484.m1
Manihot esculenta
cassava14484.m1
N
0.742
cassava15077.m1
Manihot esculenta
cassava15077.m1
N
0.753
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.722
Ca_05046
Cicer arietinum
Ca_05046
N
0.729
Ca_13295
Cicer arietinum
Ca_13295
I
0.714
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.703
Cla003996
Citrullus lanatus
Cla003996
N
0.709
Cucsa.280310
Cucumis sativus
Cucsa.280310
N
0.706
Eucgr.G02163
Eucalyptus grandis
Eucgr.G02163
N
0.737
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.726
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.723
evm.TU.supercontig_2.240
Carica papaya
evm.TU.supercontig_2.240
I
0.749
F775_03572
Aegilops tauschii
F775_03572
N
0.778
GAI
Arabidopsis lyrata
fgenesh2_kg.1__1634__AT1G14920.1
N
0.717
RGA1
Arabidopsis lyrata
fgenesh2_kg.5__65__AT2G01570.1
N
0.710
GLYMA05G27190
Glycine max
GLYMA05G27190
N
0.732
GLYMA08G10140
Glycine max
GLYMA08G10140
N
0.735
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.700
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.703
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.719
Gorai.002G177000
Gossypium raimondii
Gorai.002G177000
N
0.731
GRMZM2G144744
Zea mays
GRMZM2G144744
N
0.733
LjT15P09.140.nc
Lotus japonicus
LjT15P09.140.nc
N
0.708
LjT40K11.90.nc
Lotus japonicus
LjT40K11.90.nc
N
0.708
LPERR03G26000
Leersia perrieri
LPERR03G26000
N
0.707
Lus10009133.g
Linum usitatissimum
Lus10009133.g
N
0.726
MDP0000237978
Malus domestica
MDP0000237978
N
0.748
MDP0000669451
Malus domestica
MDP0000669451
I
0.721
mgf008289m
Mimulus guttatus
mgf008289m
N
0.794
mgf025444m
Mimulus guttatus
mgf025444m
N
0.837
OB03G38380
Oryza brachyantha
OB03G38380
N
0.707
OBART03G31370
Oryza barthii
OBART03G31370
N
0.713
OGLUM03G31610
Oryza glumaepatula
OGLUM03G31610
N
0.710
OMERI03G27970
Oryza meridionalis
OMERI03G27970
N
0.713
ONIVA03G32670
Oryza nivara
ONIVA03G32670
N
0.713
OPUNC03G28530
Oryza punctata
OPUNC03G28530
N
0.710
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.703
ORGLA03G0290200
Oryza glaberrima
ORGLA03G0290200
N
0.713
ORUFI03G32650
Oryza rufipogon
ORUFI03G32650
N
0.710
SLR1
Oryza sativa
OS03G0707600
N
0.713
Pavir.Ia00840
Panicum virgatum
Pavir.Ia00840
N
0.709
PGSC0003DMG400015692
Solanum tuberosum
PGSC0003DMG400015692
N
0.720
PK14700.1
Cannabis sativa
PK14700.1
N
0.711
Pm006304
Prunus mume
Pm006304
N
0.756
Pm014329
Prunus mume
Pm014329
I
0.718
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.712
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.712
POPTR_0008s13090
Populus trichocarpa
POPTR_0008s13090
N
0.751
POPTR_0010s12080
Populus trichocarpa
POPTR_0010s12080
N
0.742
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.712
PRUPE_ppa005944mg
Prunus persica
PRUPE_ppa005944mg
N
0.751
SapurV1A.0015s0210
Salix purpurea
SapurV1A.0015s0210
N
0.741
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.703
SapurV1A.0405s0090
Salix purpurea
SapurV1A.0405s0090
N
0.734
Solyc11g011260.1
Solanum lycopersicum
Solyc11g011260.1
N
0.714
TCM_010965
Theobroma cacao
TCM_010965
N
0.748
Thhalv10005482m.g
Eutrema salsugineum
Thhalv10005482m.g
N
0.718
Thhalv10007323m.g
Eutrema salsugineum
Thhalv10007323m.g
N
0.711
GAI1
Vitis vinifera
VIT_01s0011g05260
N
0.753
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.725