PK03169.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK03169.1 T247374_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK03169.1 LOB 45 148

Links

Other LOB family TFs
Other Cannabis sativa TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27524.m000293 Ricinus communis 27524.m000293 N 0.786
28207.m000107 Ricinus communis 28207.m000107 N 0.808
29661.m000902 Ricinus communis 29661.m000902 N 0.724
30170.m013752 Ricinus communis 30170.m013752 N 0.704
AC234149.1_FG002 Zea mays AC234149.1_FG002 N 0.724
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.899
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.959
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.724
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.959
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.714
LBD40 Arabidopsis thaliana AT1G67100 N 0.909
LBD42 Arabidopsis thaliana AT1G68510 N 0.784
LBD41 Arabidopsis thaliana AT3G02550 N 0.879
LBD38 Arabidopsis thaliana AT3G49940 N 0.714
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.867
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.837
Bo1g003550 Brassica oleracea Bo1g003550 N 0.714
Bo1g156310 Brassica oleracea Bo1g156310 N 0.869
Bo2g055410 Brassica oleracea Bo2g055410 N 0.889
Bo3g055690 Brassica oleracea Bo3g055690 N 0.879
Bo6g106960 Brassica oleracea Bo6g106960 N 0.773
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N 0.879
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.786
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.899
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.878
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.704
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.714
Bra004315 Brassica rapa Bra004315 N 0.773
Bra011772 Brassica rapa Bra011772 N 0.714
Bra021433 Brassica rapa Bra021433 N 0.879
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.828
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.828
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.724
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N 0.879
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.773
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.714
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.909
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.859
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.878
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.888
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.724
Carubv10015363m.g Capsella rubella Carubv10015363m.g N 0.879
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.714
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.909
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.773
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.724
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.724
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.714
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.827
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.816
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.949
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.969
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.724
Ca_05488 Cicer arietinum Ca_05488 N 0.707
Ca_09342 Cicer arietinum Ca_09342 N 0.704
Ca_22996 Cicer arietinum Ca_22996 N 0.848
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.939
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.714
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.949
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.798
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.857
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.745
Cla007208 Citrullus lanatus Cla007208 N 0.959
Cla019264 Citrullus lanatus Cla019264 N 0.867
Cla020705 Citrullus lanatus Cla020705 N 0.786
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.959
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.867
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.786
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.768
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.857
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.827
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.714
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.918
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.788
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.773
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.714
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.704
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.949
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.838
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.724
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.714
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.784
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.879
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.816
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.704
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.949
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.704
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.747
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.949
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.704
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.939
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.704
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.939
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.939
GLYMA20G24950 Glycine max GLYMA20G24950 N 0.758
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.816
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.816
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.755
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.719
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.724
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.970
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.827
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.776
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.835
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.786
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.867
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.818
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.800
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.704
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.960
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.918
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.939
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.959
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.704
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.889
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.908
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.929
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.714
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.714
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.816
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.837
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.867
LPERR07G17900 Leersia perrieri LPERR07G17900 N 0.730
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.714
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.714
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.899
MDP0000136037 Malus domestica MDP0000136037 N 0.949
MDP0000233303 Malus domestica MDP0000233303 N 0.794
MDP0000446238 Malus domestica MDP0000446238 N 0.717
MDP0000881409 Malus domestica MDP0000881409 N 0.712
mgf010898m Mimulus guttatus mgf010898m N 0.898
mgf011656m Mimulus guttatus mgf011656m N 0.908
mgf017960m Mimulus guttatus mgf017960m N 0.786
mgf021653m Mimulus guttatus mgf021653m N 0.722
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.859
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.714
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.899
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.949
OB01G11830 Oryza brachyantha OB01G11830 N 0.837
OB01G27020 Oryza brachyantha OB01G27020 N 0.727
OBART01G01940 Oryza barthii OBART01G01940 N 0.837
OBART01G17510 Oryza barthii OBART01G17510 N 0.867
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.837
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.867
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.778
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.827
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.867
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.837
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.867
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.837
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.867
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.949
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.745
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.857
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.788
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.837
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.837
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.867
OS01G0511000 Oryza sativa OS01G0511000 N 0.867
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.704
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.806
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.827
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.798
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.798
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.816
Pavir.J11724 Panicum virgatum Pavir.J11724 N 0.837
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.837
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.908
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.827
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.724
PK03075.1 Cannabis sativa PK03075.1 N 0.701
PK03977.1 Cannabis sativa PK03977.1 N 0.704
PK04548.1 Cannabis sativa PK04548.1 N 0.816
PK04625.1 Cannabis sativa PK04625.1 N 0.791
PK15647.1 Cannabis sativa PK15647.1 N 0.716
PK25954.1 Cannabis sativa PK25954.1 N 0.739
PK29811.1 Cannabis sativa PK29811.1 N 0.721
Pm015540 Prunus mume Pm015540 N 0.859
Pm029059 Prunus mume Pm029059 N 0.808
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.714
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.939
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.949
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.707
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.714
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.837
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.796
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.808
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.970
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.808
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.804
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.796
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.714
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.949
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.838
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.828
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.837
Sb09g025700 Sorghum bicolor Sb09g025700 N 0.735
Sb09g025710 Sorghum bicolor Sb09g025710 N 0.763
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.806
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.714
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.765
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.765
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.732
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.732
Si002412m.g Setaria italica Si002412m.g N 0.816
Si004887m.g Setaria italica Si004887m.g N 0.800
Si022660m.g Setaria italica Si022660m.g N 0.837
Si031011m.g Setaria italica Si031011m.g N 0.704
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.908
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.724
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.837
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.827
TCM_000766 Theobroma cacao TCM_000766 N 0.724
TCM_009888 Theobroma cacao TCM_009888 N 0.847
TCM_012338 Theobroma cacao TCM_012338 N 0.827
TCM_019459 Theobroma cacao TCM_019459 N 0.960
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.704
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.909
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N 0.786
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.889
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.714
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.786
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.786
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.859
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.859
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.859
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.825
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N 0.714
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.773
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.876
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.724
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.929
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.857