PRUPE_ppa010427mg (Prunus persica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PRUPE_ppa010427mg T249715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.848 0.691
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.848 0.691
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ19399 MADF 27 102

Links

Other MADF family TFs
Other Prunus persica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I 0.838
29814.m000741 Ricinus communis 29814.m000741 I 0.899
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.813
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.814
Aquca_039_00151 Aquilegia coerulea Aquca_039_00151 N 0.816
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.891
AT5G05550 Arabidopsis thaliana AT5G05550 D 0.848
Bo5g136850 Brassica oleracea Bo5g136850 I 0.892
Bo9g177060 Brassica oleracea Bo9g177060 I 0.851
Bostr.13129s0416 Boechera stricta Bostr.13129s0416 I 0.858
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.891
Bra009119 Brassica rapa Bra009119 I 0.827
Bra034165 Brassica rapa Bra034165 I 0.885
Bra034866 Brassica rapa Bra034866 I 0.896
Cagra.1504s0056 Capsella grandiflora Cagra.1504s0056 I 0.867
Carubv10001830m.g Capsella rubella Carubv10001830m.g I 0.864
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.907
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.838
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.834
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.838
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.818
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.884
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.912
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.820
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.903
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.818
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.818
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.862
MDP0000097759 Malus domestica MDP0000097759 N 0.914
MDP0000255104 Malus domestica MDP0000255104 I 0.820
MDP0000281471 Malus domestica MDP0000281471 I 0.837
MDP0000943251 Malus domestica MDP0000943251 N 0.903
mgf000047m Mimulus guttatus mgf000047m I 0.822
mgf006505m Mimulus guttatus mgf006505m I 0.850
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.818
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.884
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.891
PK20477.1 Cannabis sativa PK20477.1 N 0.874
PK22475.1 Cannabis sativa PK22475.1 N 0.839
Pm013209 Prunus mume Pm013209 I 0.820
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.887
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.820
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.900
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.891
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.891
TCM_042467 Theobroma cacao TCM_042467 N 0.906
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.892
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.915
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.869