PV08_00691 (Exophiala spinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PV08_00691 T255992_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW20116 MADS box 10 57

Links

Other MADS box family TFs
Other Exophiala spinifera TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.000
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.000
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.000
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.000
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.000
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.000
OB10G10530 Oryza brachyantha OB10G10530 N 0.000
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.000
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.000
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.000
OPUNC10G00600 Oryza punctata OPUNC10G00600 N 0.000
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.000
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.000
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.000
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.000
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.000
Si029480m.g Setaria italica Si029480m.g N 0.000
Si036337m.g Setaria italica Si036337m.g N 0.000
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.000
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.000