TCM_016551 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_016551 T280513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.745 0.774
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.745 0.774
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.729 0.817
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.729 0.817
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.728 0.817
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.728 0.817
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.707 0.753
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.691 0.806
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.671 0.774
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.665 0.742
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.663 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.663 0.753
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.661 0.763
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.661 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY25138 Myb 15 62
EOY25138 Myb 68 113

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

589 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001050 Ricinus communis 29738.m001050 I
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I
RAV1 Arabidopsis thaliana AT1G13260 D
RAV2 Arabidopsis thaliana AT1G68840 D
ARF14 Arabidopsis thaliana AT3G25730 D
BGIOSGA000982 Oryza indica BGIOSGA000982 I
BGIOSGA002747 Oryza indica BGIOSGA002747 I
BGIOSGA002748 Oryza indica BGIOSGA002748 I
BGIOSGA002753 Oryza indica BGIOSGA002753 I
BGIOSGA020315 Oryza indica BGIOSGA020315 I
Bo2g061320 Brassica oleracea Bo2g061320 I
Bo2g138650 Brassica oleracea Bo2g138650 I
Bo3g138550 Brassica oleracea Bo3g138550 I
Bo5g015210 Brassica oleracea Bo5g015210 I
Bo5g043120 Brassica oleracea Bo5g043120 I
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I
Bra011002 Brassica rapa Bra011002 I
Bra019821 Brassica rapa Bra019821 I
Bra024735 Brassica rapa Bra024735 I
Bra025159 Brassica rapa Bra025159 I
Bra026509 Brassica rapa Bra026509 I
Bra026917 Brassica rapa Bra026917 I
Bra038346 Brassica rapa Bra038346 I
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I
Carubv10009612m.g Capsella rubella Carubv10009612m.g I
Carubv10019207m.g Capsella rubella Carubv10019207m.g I
Carubv10020536m.g Capsella rubella Carubv10020536m.g I
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I
Ca_08436 Cicer arietinum Ca_08436 I
Ca_24123 Cicer arietinum Ca_24123 I
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I
Cla000872 Citrullus lanatus Cla000872 I
Cla020675 Citrullus lanatus Cla020675 I
Cucsa.147340 Cucumis sativus Cucsa.147340 I
Cucsa.283870 Cucumis sativus Cucsa.283870 I
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N
GLYMA01G22260 Glycine max GLYMA01G22260 I
GLYMA02G11060 Glycine max GLYMA02G11060 I
GLYMA10G34760 Glycine max GLYMA10G34760 I
GLYMA20G32730 Glycine max GLYMA20G32730 I
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I
GRMZM2G059939 Zea mays GRMZM2G059939 I
GRMZM2G159592 Zea mays GRMZM2G159592 I
GRMZM2G169654 Zea mays GRMZM2G169654 I
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I
LPERR01G02360 Leersia perrieri LPERR01G02360 I
LPERR01G02380 Leersia perrieri LPERR01G02380 I
LPERR01G23470 Leersia perrieri LPERR01G23470 I
LPERR05G20600 Leersia perrieri LPERR05G20600 I
Lus10021707.g Linum usitatissimum Lus10021707.g I
Lus10041487.g Linum usitatissimum Lus10041487.g I
MDP0000128924 Malus domestica MDP0000128924 I
MDP0000153589 Malus domestica MDP0000153589 N
MDP0000321569 Malus domestica MDP0000321569 N
MDP0000939633 Malus domestica MDP0000939633 I
MDP0000945267 Malus domestica MDP0000945267 I
mgf019592m Mimulus guttatus mgf019592m I
MLOC_5512 Hordeum vulgare MLOC_5512 I
MLOC_56567 Hordeum vulgare MLOC_56567 I
MLOC_63261 Hordeum vulgare MLOC_63261 I
MLOC_75135 Hordeum vulgare MLOC_75135 I
MLOC_7940 Hordeum vulgare MLOC_7940 I
MTR_1g093600 Medicago truncatula MTR_1g093600 I
MTR_5g053920 Medicago truncatula MTR_5g053920 I
OB01G12600 Oryza brachyantha OB01G12600 I
OBART01G02610 Oryza barthii OBART01G02610 I
OBART01G27360 Oryza barthii OBART01G27360 I
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I
OMERI01G02480 Oryza meridionalis OMERI01G02480 I
OMERI01G02500 Oryza meridionalis OMERI01G02500 I
OMERI01G25110 Oryza meridionalis OMERI01G25110 I
OMERI05G22110 Oryza meridionalis OMERI05G22110 I
ONIVA01G02970 Oryza nivara ONIVA01G02970 I
ONIVA01G02990 Oryza nivara ONIVA01G02990 I
ONIVA01G31290 Oryza nivara ONIVA01G31290 I
ONIVA05G26000 Oryza nivara ONIVA05G26000 I
OPUNC01G02240 Oryza punctata OPUNC01G02240 I
OPUNC01G27280 Oryza punctata OPUNC01G27280 I
OPUNC05G22370 Oryza punctata OPUNC05G22370 I
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I
OS01G0140700 Oryza sativa OS01G0140700 I
OS01G0141000 Oryza sativa OS01G0141000 I
OS01G0693400 Oryza sativa OS01G0693400 I
OS05G0549800 Oryza sativa OS05G0549800 I
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I
Pavir.J00384 Panicum virgatum Pavir.J00384 I
Pavir.J13012 Panicum virgatum Pavir.J13012 I
Pavir.J23476 Panicum virgatum Pavir.J23476 I
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I
PK15652.1 Cannabis sativa PK15652.1 I
Pm015500 Prunus mume Pm015500 I
Pm029015 Prunus mume Pm029015 I
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I
Sb03g006590 Sorghum bicolor Sb03g006590 I
Sb03g031860 Sorghum bicolor Sb03g031860 I
Sb09g027530 Sorghum bicolor Sb09g027530 I
RAV1 Arabidopsis lyrata scaffold_101479.1 I
TEM1 Arabidopsis lyrata scaffold_102941.1 I
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I
Si001909m.g Setaria italica Si001909m.g I
Si004045m.g Setaria italica Si004045m.g I
Si024576m.g Setaria italica Si024576m.g I
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I
TCM_011862 Theobroma cacao TCM_011862 I
TCM_019508 Theobroma cacao TCM_019508 I
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I
TRIUR3_24851 Triticum urartu TRIUR3_24851 I
TRIUR3_27886 Triticum urartu TRIUR3_27886 I
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I