CBG17906 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG17906 T301569_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.816 0.463
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.816 0.463
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.795 0.537
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG17906 Nuclear receptor 2 69

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01229 Caenorhabditis briggsae CBG01229 N 0.848
CBG01250 Caenorhabditis briggsae CBG01250 D 0.795
CBG06387 Caenorhabditis briggsae CBG06387 I 0.831
CBG17898 Caenorhabditis briggsae CBG17898 I 0.758
CBN07208 Caenorhabditis brenneri CBN07208 N 0.794
CBN21664 Caenorhabditis brenneri CBN21664 N 0.829
CJA19466 Caenorhabditis japonica CJA19466 I 0.802
CRE08753 Caenorhabditis remanei CRE08753 I 0.864
CRE08754 Caenorhabditis remanei CRE08754 I 0.824
CRE08755 Caenorhabditis remanei CRE08755 I 0.869
CRE09168 Caenorhabditis remanei CRE09168 N 0.866
CRE09173 Caenorhabditis remanei CRE09173 N 0.789
CRE09175 Caenorhabditis remanei CRE09175 N 0.855
CRE18696 Caenorhabditis remanei CRE18696 N 0.963
CRE19030 Caenorhabditis remanei CRE19030 N 0.913
CRE27865 Caenorhabditis remanei CRE27865 N 0.817
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.874
nhr-95 Caenorhabditis elegans WBGene00003685 N 0.803
nhr-115 Caenorhabditis elegans WBGene00003705 N 0.784
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.865
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.828
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.809
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.751
nhr-180 Caenorhabditis elegans WBGene00017961 I 0.796
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.816
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.746
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.780
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.854
nhr-228 Caenorhabditis elegans WBGene00020852 N 0.867