scaffold1235-EXSNAP2012.2 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold1235-EXSNAP2012.2 T310174_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.857 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1235-EXSNAP2012.2 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.806
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.750
CBG03687 Caenorhabditis briggsae CBG03687 I 0.770
CBG04789 Caenorhabditis briggsae CBG04789 I 0.756
CBG12152 Caenorhabditis briggsae CBG12152 I 0.904
CBG16375 Caenorhabditis briggsae CBG16375 I 0.848
CBN03149 Caenorhabditis brenneri CBN03149 N 0.807
CBN03440 Caenorhabditis brenneri CBN03440 I 0.784
CBN03769 Caenorhabditis brenneri CBN03769 I 0.851
CBN04619 Caenorhabditis brenneri CBN04619 I 0.810
CBN18264 Caenorhabditis brenneri CBN18264 I 0.781
CBN24070 Caenorhabditis brenneri CBN24070 I 0.813
CJA10576 Caenorhabditis japonica CJA10576 I 0.843
CRE09011 Caenorhabditis remanei CRE09011 I 0.805
CRE17310 Caenorhabditis remanei CRE17310 I 0.792
CRE17354 Caenorhabditis remanei CRE17354 I 0.841
CRE17355 Caenorhabditis remanei CRE17355 I 0.762
CRE18529 Caenorhabditis remanei CRE18529 I 0.904
CRE27174 Caenorhabditis remanei CRE27174 I 0.756
CRE27659 Caenorhabditis remanei CRE27659 I 0.829
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.888
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.844
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.810
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.810
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.784
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.785
L889_g16048 Steinernema feltiae L889_g16048 N 0.794
L889_g17146 Steinernema feltiae L889_g17146 I 0.826
L892_g10708 Steinernema scapterisci L892_g10708 I 0.812
L892_g8140 Steinernema scapterisci L892_g8140 I 0.796
L892_g8146 Steinernema scapterisci L892_g8146 N 0.787
L893_g3450 Steinernema glaseri L893_g3450 N 0.811
L893_g9517 Steinernema glaseri L893_g9517 I 0.787
L898_g9580 Steinernema monticolum L898_g9580 I 0.830
NECAME_01500 Necator americanus NECAME_01500 I 0.866
PPA08785 Pristionchus pacificus PPA08785 I 0.772
PPA10478 Pristionchus pacificus PPA10478 I 0.772
PPA13604 Pristionchus pacificus PPA13604 N 0.748
PPA29361 Pristionchus pacificus PPA29361 I 0.989
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.782
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.772
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.772
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.816
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.767
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.750
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.796
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.849
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.764
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.885
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.843
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.805
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.857
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.892
nhr-33 Caenorhabditis elegans WBGene00013976 N 0.804
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.890