GSMUA_Achr9G29480_001 (Musa acuminata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GSMUA_Achr9G29480_001 T019536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P29480_001 B3 85 187

Links

Other B3 family TFs
Other Musa acuminata TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARF16 Arabidopsis thaliana AT4G30080 D 0.753
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.732
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.708
ARF10 Arabidopsis thaliana AT2G28350 I 0.719
ARF10 Oryza indica BGIOSGA016767 I 0.701
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.722
Bo1g014600 Brassica oleracea Bo1g014600 I 0.753
Bo4g071620 Brassica oleracea Bo4g071620 I 0.708
Bo7g114200 Brassica oleracea Bo7g114200 I 0.763
Bra011162 Brassica rapa Bra011162 I 0.753
Bra011955 Brassica rapa Bra011955 I 0.708
Bra024109 Brassica rapa Bra024109 I 0.763
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.732
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.722
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.708
F775_32978 Aegilops tauschii F775_32978 I 0.719
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.719
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.722
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.701
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.711
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.711
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.711
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.732
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.711
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.722
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.719
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.722
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.711
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.711
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.711
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.722
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.722
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.722
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.722
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.722
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.708
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.732
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.711
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.722
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.722
OB06G32920 Oryza brachyantha OB06G32920 I 0.732
OB10G20590 Oryza brachyantha OB10G20590 I 0.722
OBART04G18910 Oryza barthii OBART04G18910 I 0.701
OBART06G25230 Oryza barthii OBART06G25230 I 0.732
OBART10G13410 Oryza barthii OBART10G13410 I 0.722
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.701
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.732
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.722
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.732
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.701
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.732
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.722
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.732
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.701
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.722
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.701
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.732
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.722
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.701
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.732
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.722
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.732
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.722
OS04G0519700 Oryza sativa OS04G0519700 I 0.701
ARF18 Oryza sativa OS06G0685700 I 0.732
ARF22 Oryza sativa OS10G0479900 I 0.722
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.708
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.732
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.773
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.711
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.784
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.732
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.732
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.732
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.722
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.711
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.701
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.732
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.742
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.784
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.722
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.719
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.732
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.753
Si005991m.g Setaria italica Si005991m.g I 0.732
Si009541m.g Setaria italica Si009541m.g I 0.711
Si016509m.g Setaria italica Si016509m.g I 0.708
Si034525m.g Setaria italica Si034525m.g I 0.722
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.732
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.711
TCM_022163 Theobroma cacao TCM_022163 I 0.722
TCM_035002 Theobroma cacao TCM_035002 I 0.784
TCM_042067 Theobroma cacao TCM_042067 I 0.711
TCM_043157 Theobroma cacao TCM_043157 I 0.742
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.719
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.711
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.742
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.711
Ca_02541 Cicer arietinum Ca_02541 I 0.708
Ca_17136 Cicer arietinum Ca_17136 I 0.732
Ca_26121 Cicer arietinum Ca_26121 I 0.722
Cla008883 Citrullus lanatus Cla008883 I 0.701
Cla018574 Citrullus lanatus Cla018574 I 0.732
Cla022413 Citrullus lanatus Cla022413 I 0.753
Pm018533 Prunus mume Pm018533 I 0.742
Pm019126 Prunus mume Pm019126 I 0.773
Pm030120 Prunus mume Pm030120 I 0.732
Pm031275 Prunus mume Pm031275 I 0.711
27494.m000045 Ricinus communis 27494.m000045 I 0.722
27538.m000327 Ricinus communis 27538.m000327 I 0.722
29908.m005953 Ricinus communis 29908.m005953 I 0.784
30078.m002329 Ricinus communis 30078.m002329 I 0.722
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.732
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.784
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.722
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.701
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.711
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.732
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.701
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.763
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.701
mgf000336m Mimulus guttatus mgf000336m I 0.722
mgf005300m Mimulus guttatus mgf005300m I 0.732
mgf016139m Mimulus guttatus mgf016139m I 0.719
mgf024607m Mimulus guttatus mgf024607m I 0.732
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.732
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.719
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.753
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.753
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.719
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.753
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.719
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.784
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.732
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.732
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.745
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.711
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.711
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.732
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.784
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.742
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.701
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.773
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.732
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.701
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.732
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.722
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.711
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.753
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.763
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.732
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.732
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.732
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.732
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.708
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.732
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.732
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.732
MDP0000131481 Malus domestica MDP0000131481 I 0.711
MDP0000221322 Malus domestica MDP0000221322 I 0.711
MDP0000256621 Malus domestica MDP0000256621 I 0.763
MDP0000750392 Malus domestica MDP0000750392 I 0.711
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.732
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.732
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.784
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.742
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.701
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.732
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.732
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.773
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.701
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.742
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.711
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.784
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.722
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.722
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.722
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.719
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.753
PK13064.1 Cannabis sativa PK13064.1 I 0.711
PK17007.1 Cannabis sativa PK17007.1 I 0.742
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.794
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.722
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.750
ARF17 Arabidopsis thaliana AT1G77850 N 0.742
Bo6g081980 Brassica oleracea Bo6g081980 N 0.701
Bra003665 Brassica rapa Bra003665 N 0.701
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.724
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.704
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.745
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.722
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.701
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.753
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.753
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.732
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.753
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.753
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.753
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.711