CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g000220
(
Sorghum bicolor
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Sb07g000220
T021120_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDEF1
M09774_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$IDEF1_Q2
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g000220.1
B3
244
343
LRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQMDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDALIIYKNSVPGKFIIRGE
Links
Other
B3
family TFs
Other
Sorghum bicolor
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK25011.1
Cannabis sativa
PK25011.1
D
0.000
Cla008712
Citrullus lanatus
Cla008712
I
0.000
Thhalv10028592m.g
Eutrema salsugineum
Thhalv10028592m.g
I
0.000
SapurV1A.0106s0340
Salix purpurea
SapurV1A.0106s0340
I
0.000
SapurV1A.0042s0570
Salix purpurea
SapurV1A.0042s0570
I
0.000
MDP0000207866
Malus domestica
MDP0000207866
I
0.000
Gorai.013G254100
Gossypium raimondii
Gorai.013G254100
I
0.000
Gorai.004G014700
Gossypium raimondii
Gorai.004G014700
I
0.000
Carubv10002996m.g
Capsella rubella
Carubv10002996m.g
I
0.000
Cagra.2552s0003
Capsella grandiflora
Cagra.2552s0003
I
0.000
Bostr.2983s0116
Boechera stricta
Bostr.2983s0116
I
0.000
Aquca_014_00610
Aquilegia coerulea
Aquca_014_00610
I
0.000
Cucsa.087050
Cucumis sativus
Cucsa.087050
I
0.000
cassava16534.m1
Manihot esculenta
cassava16534.m1
I
0.000
AT4G03250
Arabidopsis thaliana
AT4G03250
I
0.000
VIT_06s0009g03530
Vitis vinifera
VIT_06s0009g03530
I
0.000
TCM_040945
Theobroma cacao
TCM_040945
I
0.000
PRUPE_ppa005223mg
Prunus persica
PRUPE_ppa005223mg
I
0.000
POPTR_0009s07600
Populus trichocarpa
POPTR_0009s07600
I
0.000
POPTR_0001s28350
Populus trichocarpa
POPTR_0001s28350
I
0.000
PGSC0003DMG400004714
Solanum tuberosum
PGSC0003DMG400004714
I
0.000
GLYMA18G14910
Glycine max
GLYMA18G14910
I
0.000
GLYMA14G03850
Glycine max
GLYMA14G03850
I
0.000
GLYMA08G41330
Glycine max
GLYMA08G41330
I
0.000
GLYMA04G15260
Glycine max
GLYMA04G15260
I
0.000
GLYMA02G44910
Glycine max
GLYMA02G44910
I
0.000
Bra034196
Brassica rapa
Bra034196
I
0.000
Bo9g006450
Brassica oleracea
Bo9g006450
I
0.000
29811.m000540
Ricinus communis
29811.m000540
N
0.000
GLYMA01G06403
Glycine max
GLYMA01G06403
N
0.000