TEF (Vicugna pacos)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSVPAG00000002612 T061774_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.891 0.984
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.891 0.984
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.891 0.984
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.891 0.984
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.891 0.984
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.891 0.984
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.891 0.984
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.891 0.984
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.891 0.984
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.847 0.794
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.847 0.794
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.847 0.794
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.847 0.794
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.847 0.794
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.847 0.794
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.847 0.794
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.847 0.794
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000002414 bZIP 141 203

Links

Other bZIP family TFs
Other Vicugna pacos TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIL2 Arabidopsis thaliana AT3G14180 D 0.000
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.000
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.000
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.000
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.000
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.000
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.000
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.000
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.000
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.000
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.000
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.000
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
29814.m000741 Ricinus communis 29814.m000741 I 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.000
MDP0000255104 Malus domestica MDP0000255104 I 0.000
MDP0000281471 Malus domestica MDP0000281471 I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.000
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.000
Bo1g134590 Brassica oleracea Bo1g134590 I 0.000
Bo3g065930 Brassica oleracea Bo3g065930 I 0.000
Bra021534 Brassica rapa Bra021534 I 0.000
Bra021536 Brassica rapa Bra021536 I 0.000
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.000
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.000
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.000
SELMODRAFT_68039 Selaginella moellendorffii SELMODRAFT_68039 I 0.000
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000
Cla015773 Citrullus lanatus Cla015773 I 0.000
Pm013209 Prunus mume Pm013209 I 0.000
29727.m000472 Ricinus communis 29727.m000472 I 0.000