Cmyd_10021319 (Chelonia mydas)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cmyd_10021319 T070104_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFE2L2
M08789_2.00 		Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A 		0.931 0.921
NFE2L2
M09943_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q3 		0.931 0.921
NFE2L2
M09944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4_01 		0.931 0.921
NFE2L2
M09945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4 		0.931 0.921
NFE2L2
M09946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q6 		0.931 0.921
NFE2L2
M01142_2.00 		Gallus gallus
NNRTKAYNN
NNRTMAYNN		 PBM
Lambert et al.(2019)
pTH9845 		0.931 0.937
Nfe2l2
M08077_2.00 		Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN		 ChIP-seq
Mathelier et al.(2014)
MA0150.2 		0.917 0.841
Nfe2l2
M08816_2.00 		Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A 		0.917 0.841
Nfe2
M08843_2.00 		Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A 		0.871 0.635
NFE2
M02832_2.00 		Homo sapiens
VATGACTCATB
VATGAGTCATB		 SELEX
Jolma et al.(2013)
NFE2_1 		0.868 0.651
NFE2
M04266_2.00 		Homo sapiens
VRTGASTCAYB
VRTGASTCAYB		 SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX 		0.868 0.651
NFE2
M04024_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1 		0.868 0.651
NFE2
M07813_2.00 		Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB		 ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford 		0.868 0.651
NFE2
M08793_2.00 		Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB		 Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A 		0.868 0.651
NFE2
M09486_2.00 		Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB		 Misc
Heinz et al.(2010)
K562-NFE2_GSE31477 		0.868 0.651
NFE2
M09959_2.00 		Homo sapiens
RTGASTCAGCD
HGCTGASTCAY		 Transfac
Matys et al.(2006)
V$NFE2_01 		0.868 0.651
NFE2
M09960_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_04 		0.868 0.651
NFE2
M09961_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_Q6 		0.868 0.651
NFE2
M04267_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX 		0.868 0.651
NFE2L3
M09923_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_02 		0.834 0.587
NFE2L1
M04008_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1 		0.827 0.587
NFE2L1
M08782_2.00 		Homo sapiens
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C 		0.827 0.587
Nfe2l1
M08831_2.00 		Mus musculus
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C 		0.827 0.587
NFE2L1
M09925_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2L1_Q5 		0.827 0.587
NFE2L1
M09926_2.00 		Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN		 Transfac
Matys et al.(2006)
V$TCF11_01 		0.827 0.587
Nfe2l3
M10031_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_01 		0.819 0.571
FBgn0262975
M03654_2.00 		Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN		 SELEX
Nitta et al.(2015)
cnc_1 		0.792 0.444
FBgn0262975
M03655_2.00 		Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS		 SELEX
Nitta et al.(2015)
cnc_2 		0.792 0.444
FBgn0262975
M03656_2.00 		Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC		 SELEX
Nitta et al.(2015)
cnc_3 		0.792 0.444
FBgn0262975
M08189_2.00 		Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA		 ChIP-seq
Contrino et al.(2012)
Mf3 		0.792 0.444
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10021319 bZIP 479 541

Links

Other bZIP family TFs
Other Chelonia mydas TFs

329 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.000
29841.m002855 Ricinus communis 29841.m002855 N 0.000
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.000
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.000
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.000
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.000
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.000
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.000
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.000
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.000
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.000
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.000
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.000
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.000
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.000
MDP0000248422 Malus domestica MDP0000248422 N 0.000
MDP0000375866 Malus domestica MDP0000375866 N 0.000
MDP0000574053 Malus domestica MDP0000574053 N 0.000
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.000
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.000
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.000
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.000
PK04144.1 Cannabis sativa PK04144.1 N 0.000
PK24888.1 Cannabis sativa PK24888.1 N 0.000
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.000
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.000
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.000
MBD10 Arabidopsis thaliana AT1G15340 N 0.000
MBD11 Arabidopsis thaliana AT3G15790 N 0.000
Bo8g066360 Brassica oleracea Bo8g066360 N 0.000
Bra016665 Brassica rapa Bra016665 N 0.000
Bra027207 Brassica rapa Bra027207 N 0.000
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.000
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.000
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.000
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.000
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.000
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.000
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.000
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.000
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.000
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.000
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.000
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.000
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.000
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.000
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.000
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.000
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.000
TCM_027169 Theobroma cacao TCM_027169 N 0.000
TCM_038107 Theobroma cacao TCM_038107 N 0.000
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.000
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.000
Ca_06682 Cicer arietinum Ca_06682 N 0.000
Ca_19192 Cicer arietinum Ca_19192 N 0.000
Cla015614 Citrullus lanatus Cla015614 N 0.000
Pm013666 Prunus mume Pm013666 N 0.000