CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CABZ01001457.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000087201
T091141_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000106979
C2H2 ZF
44
65
YTCKQCGKFYNTGNLTVHMRIH
ENSDARP00000106979
C2H2 ZF
71
93
YTCQQCGKSFYSTGNLAVHRRIH
ENSDARP00000106979
C2H2 ZF
99
121
YSCPQCGKSCKQNGNFETHMRTH
ENSDARP00000106979
C2H2 ZF
127
149
FICTQCRKCFSQKQNLSIHMRIH
ENSDARP00000106979
C2H2 ZF
155
177
YTCTECGKSFPHTGSLKHHMISH
ENSDARP00000106979
C2H2 ZF
183
205
FACAHCGKSFTTKASLMNHMNGH
ENSDARP00000106979
C2H2 ZF
232
254
FRCSECGKVFKHKRSLINHMKLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZAT10
Arabidopsis thaliana
AT1G27730
D
ZAT4
Arabidopsis thaliana
AT2G45120
D
AZF2
Arabidopsis thaliana
AT3G19580
D
ZAT9
Arabidopsis thaliana
AT3G60580
D
ZAT6
Arabidopsis thaliana
AT5G04340
D
AZF1
Arabidopsis thaliana
AT5G67450
D
AC211702.2_FG002
Zea mays
AC211702.2_FG002
I
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
AZF3
Arabidopsis thaliana
AT5G43170
I
BGIOSGA010468
Oryza indica
BGIOSGA010468
I
Bo1g081350
Brassica oleracea
Bo1g081350
I
Bo1g113530
Brassica oleracea
Bo1g113530
I
Bo2g168030
Brassica oleracea
Bo2g168030
I
Bo3g037560
Brassica oleracea
Bo3g037560
I
Bo3g142840
Brassica oleracea
Bo3g142840
I
Bo4g195370
Brassica oleracea
Bo4g195370
I
Bo5g052290
Brassica oleracea
Bo5g052290
I
Bo5g113850
Brassica oleracea
Bo5g113850
I
Bo7g048650
Brassica oleracea
Bo7g048650
I
Bo7g065200
Brassica oleracea
Bo7g065200
I
Bo9g181170
Brassica oleracea
Bo9g181170
I
Bra000372
Brassica rapa
Bra000372
I
Bra009464
Brassica rapa
Bra009464
I
Bra010922
Brassica rapa
Bra010922
I
Bra012914
Brassica rapa
Bra012914
I
Bra018817
Brassica rapa
Bra018817
I
Bra022436
Brassica rapa
Bra022436
I
Bra029985
Brassica rapa
Bra029985
I
Bra031834
Brassica rapa
Bra031834
I
Bra032845
Brassica rapa
Bra032845
I
Bra033666
Brassica rapa
Bra033666
I
Bra037845
Brassica rapa
Bra037845
I
Bra038219
Brassica rapa
Bra038219
I
Bra040325
Brassica rapa
Bra040325
I
BRADI1G14750
Brachypodium distachyon
BRADI1G14750
I
BRADI1G16010
Brachypodium distachyon
BRADI1G16010
I
STZ
Arabidopsis lyrata
fgenesh2_kg.1__2932__AT1G27730.1
I
AZF2
Arabidopsis lyrata
fgenesh2_kg.3__2173__AT3G19580.2
I
fgenesh2_kg.4__2705__AT2G45120.1
Arabidopsis lyrata
fgenesh2_kg.4__2705__AT2G45120.1
I
GLYMA01G18606
Glycine max
GLYMA01G18606
I
GLYMA01G32981
Glycine max
GLYMA01G32981
I
GLYMA03G03950
Glycine max
GLYMA03G03950
I
GLYMA04G04760
Glycine max
GLYMA04G04760
I
GLYMA06G04840
Glycine max
GLYMA06G04840
I
GLYMA10G40400
Glycine max
GLYMA10G40400
I
GLYMA14G09760
Glycine max
GLYMA14G09760
I
GLYMA17G35430
Glycine max
GLYMA17G35430
I
GRMZM2G455889
Zea mays
GRMZM2G455889
I
GSMUA_Achr2G13410_001
Musa acuminata
GSMUA_Achr2G13410_001
I
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
LPERR03G19200
Leersia perrieri
LPERR03G19200
I
LPERR03G21480
Leersia perrieri
LPERR03G21480
I
MTR_0160s0030
Medicago truncatula
MTR_0160s0030
I
MTR_1g018420
Medicago truncatula
MTR_1g018420
I
MTR_1g106730
Medicago truncatula
MTR_1g106730
I
MTR_3g102980
Medicago truncatula
MTR_3g102980
I
MTR_4g027440
Medicago truncatula
MTR_4g027440
I
OB03G31780
Oryza brachyantha
OB03G31780
I
OB03G42170
Oryza brachyantha
OB03G42170
I
OBART03G22570
Oryza barthii
OBART03G22570
I
OGLUM03G23350
Oryza glumaepatula
OGLUM03G23350
I
OLONG_027628
Oryza longistaminata
OLONG_027628
I
ORGLA03G0210300
Oryza glaberrima
ORGLA03G0210300
I
ORUFI03G23240
Oryza rufipogon
ORUFI03G23240
I
OS03G0437200
Oryza sativa
OS03G0437200
I
PGSC0003DMG400002383
Solanum tuberosum
PGSC0003DMG400002383
I
PGSC0003DMG400011548
Solanum tuberosum
PGSC0003DMG400011548
I
PGSC0003DMG400028275
Solanum tuberosum
PGSC0003DMG400028275
I
PGSC0003DMG400034322
Solanum tuberosum
PGSC0003DMG400034322
I
PGSC0003DMG400041467
Solanum tuberosum
PGSC0003DMG400041467
I
PGSC0003DMG400045547
Solanum tuberosum
PGSC0003DMG400045547
I
POPTR_0002s12010
Populus trichocarpa
POPTR_0002s12010
I
POPTR_0002s14460
Populus trichocarpa
POPTR_0002s14460
I
POPTR_0009s09250
Populus trichocarpa
POPTR_0009s09250
I
POPTR_0014s01760
Populus trichocarpa
POPTR_0014s01760
I
PRUPE_ppa009924mg
Prunus persica
PRUPE_ppa009924mg
I
PRUPE_ppa011060mg
Prunus persica
PRUPE_ppa011060mg
I
scaffold_503291.1
Arabidopsis lyrata
scaffold_503291.1
I
C2H2
Arabidopsis lyrata
scaffold_600374.1
I
AZF3
Arabidopsis lyrata
scaffold_800768.1
I
Solyc12g088390.1
Solanum lycopersicum
Solyc12g088390.1
I
TCM_000780
Theobroma cacao
TCM_000780
I
TCM_007214
Theobroma cacao
TCM_007214
I
TCM_034720
Theobroma cacao
TCM_034720
I
Traes_4BS_FE945D2FC
Triticum aestivum
Traes_4BS_FE945D2FC
I
VIT_03s0091g00690
Vitis vinifera
VIT_03s0091g00690
I
VIT_07s0129g00240
Vitis vinifera
VIT_07s0129g00240
I
VIT_15s0021g02720
Vitis vinifera
VIT_15s0021g02720
I
VIT_18s0001g09230
Vitis vinifera
VIT_18s0001g09230
I
Ca_01586
Cicer arietinum
Ca_01586
I
Ca_05641
Cicer arietinum
Ca_05641
I
Ca_18364
Cicer arietinum
Ca_18364
I
Ca_23672
Cicer arietinum
Ca_23672
I
Cla001400
Citrullus lanatus
Cla001400
I
Cla022966
Citrullus lanatus
Cla022966
I
Pm005390
Prunus mume
Pm005390
I
Pm021284
Prunus mume
Pm021284
I
28152.m000908
Ricinus communis
28152.m000908
I
30170.m013751
Ricinus communis
30170.m013751
I
cassava12475.valid.m1
Manihot esculenta
cassava12475.valid.m1
I
cassava32957.m1
Manihot esculenta
cassava32957.m1
I
cassava35732.valid.m1
Manihot esculenta
cassava35732.valid.m1
I
cassava43667.valid.m1
Manihot esculenta
cassava43667.valid.m1
I
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
Cucsa.395710
Cucumis sativus
Cucsa.395710
I
mgf006006m
Mimulus guttatus
mgf006006m
I
mgf022203m
Mimulus guttatus
mgf022203m
I
Bostr.13158s0058
Boechera stricta
Bostr.13158s0058
I
Bostr.15697s0099
Boechera stricta
Bostr.15697s0099
I
Bostr.19424s0704
Boechera stricta
Bostr.19424s0704
I
Bostr.2128s0015
Boechera stricta
Bostr.2128s0015
I
Bostr.25993s0262
Boechera stricta
Bostr.25993s0262
I
Bostr.26675s0176
Boechera stricta
Bostr.26675s0176
I
Bostr.3148s0159
Boechera stricta
Bostr.3148s0159
I
Cagra.0239s0063
Capsella grandiflora
Cagra.0239s0063
I
Cagra.6011s0004
Capsella grandiflora
Cagra.6011s0004
I
Cagra.6943s0031
Capsella grandiflora
Cagra.6943s0031
I
Cagra.9217s0012
Capsella grandiflora
Cagra.9217s0012
I
Carubv10001868m.g
Capsella rubella
Carubv10001868m.g
I
Carubv10014391m.g
Capsella rubella
Carubv10014391m.g
I
Carubv10017660m.g
Capsella rubella
Carubv10017660m.g
I
Carubv10023569m.g
Capsella rubella
Carubv10023569m.g
I
Ciclev10002297m.g
Citrus clementina
Ciclev10002297m.g
I
Ciclev10020499m.g
Citrus clementina
Ciclev10020499m.g
I
Ciclev10029065m.g
Citrus clementina
Ciclev10029065m.g
I
Eucgr.F02262
Eucalyptus grandis
Eucgr.F02262
I
Eucgr.G01247
Eucalyptus grandis
Eucgr.G01247
I
evm.TU.supercontig_2070.1
Carica papaya
evm.TU.supercontig_2070.1
I
evm.TU.supercontig_249.7
Carica papaya
evm.TU.supercontig_249.7
I
evm.TU.supercontig_6.32
Carica papaya
evm.TU.supercontig_6.32
I
gene02558-v1.0-hybrid
Fragaria vesca
gene02558-v1.0-hybrid
I
Gorai.001G175400
Gossypium raimondii
Gorai.001G175400
I
Gorai.002G132600
Gossypium raimondii
Gorai.002G132600
I
Gorai.004G164000
Gossypium raimondii
Gorai.004G164000
I
Gorai.005G232300
Gossypium raimondii
Gorai.005G232300
I
Gorai.008G020700
Gossypium raimondii
Gorai.008G020700
I
Gorai.010G025200
Gossypium raimondii
Gorai.010G025200
I
Gorai.013G050100
Gossypium raimondii
Gorai.013G050100
I
Lus10009278.g
Linum usitatissimum
Lus10009278.g
I
MDP0000198015
Malus domestica
MDP0000198015
I
MDP0000319225
Malus domestica
MDP0000319225
I
MDP0000573176
Malus domestica
MDP0000573176
I
MDP0000762756
Malus domestica
MDP0000762756
I
orange1.1g024499m.g
Citrus sinensis
orange1.1g024499m.g
I
orange1.1g038669m.g
Citrus sinensis
orange1.1g038669m.g
I
orange1.1g044606m.g
Citrus sinensis
orange1.1g044606m.g
I
SapurV1A.0005s0440
Salix purpurea
SapurV1A.0005s0440
I
SapurV1A.0019s0280
Salix purpurea
SapurV1A.0019s0280
I
SapurV1A.0033s0440
Salix purpurea
SapurV1A.0033s0440
I
SapurV1A.0248s0230
Salix purpurea
SapurV1A.0248s0230
I
SapurV1A.0845s0100
Salix purpurea
SapurV1A.0845s0100
I
Thhalv10001538m.g
Eutrema salsugineum
Thhalv10001538m.g
I
Thhalv10010909m.g
Eutrema salsugineum
Thhalv10010909m.g
I
Thhalv10014546m.g
Eutrema salsugineum
Thhalv10014546m.g
I
Thhalv10021307m.g
Eutrema salsugineum
Thhalv10021307m.g
I
PK10188.1
Cannabis sativa
PK10188.1
I
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
chr5.CM0096.480.nc
Lotus japonicus
chr5.CM0096.480.nc
I
chr5.CM0200.550.nc
Lotus japonicus
chr5.CM0200.550.nc
I