BRADI1G14750 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI1G14750 T081985_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.792 0.870
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.773 0.826
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.770 0.674
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.769 0.696
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.769 0.674
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.766 0.783
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.766 0.783
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.766 0.783
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.757 0.761
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G14750.1 C2H2 ZF 80 102
BRADI1G14750.1 C2H2 ZF 142 164

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.803
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.798
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.798
OS12G0583700 Oryza sativa OS12G0583700 I 0.798
Si023013m.g Setaria italica Si023013m.g I 0.798
Bo1g113530 Brassica oleracea Bo1g113530 I 0.797
Bo5g113850 Brassica oleracea Bo5g113850 I 0.797
Bra022436 Brassica rapa Bra022436 I 0.797
Bra038219 Brassica rapa Bra038219 I 0.797
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.797
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.797
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.797
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.797
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.797
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.797
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.797
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.797
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.797
TCM_007214 Theobroma cacao TCM_007214 I 0.797
TCM_034720 Theobroma cacao TCM_034720 I 0.797
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.797
Ca_01586 Cicer arietinum Ca_01586 I 0.797
Ca_18364 Cicer arietinum Ca_18364 I 0.797
Pm005390 Prunus mume Pm005390 I 0.797
Pm021284 Prunus mume Pm021284 I 0.797
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.797
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.797
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.797
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.797
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.797
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.797
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.797
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.797
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.797
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.797
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.797
MDP0000198015 Malus domestica MDP0000198015 I 0.797
MDP0000319225 Malus domestica MDP0000319225 I 0.797
MDP0000573176 Malus domestica MDP0000573176 I 0.797
MDP0000762756 Malus domestica MDP0000762756 I 0.797
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.797
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.797
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.797
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.797
PK10188.1 Cannabis sativa PK10188.1 I 0.797
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.797
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.797
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.796
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.796
Bo5g052290 Brassica oleracea Bo5g052290 I 0.795
Bra032845 Brassica rapa Bra032845 I 0.795
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.795
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.794
Bo4g104940 Brassica oleracea Bo4g104940 I 0.793
Bo6g077190 Brassica oleracea Bo6g077190 I 0.793
Bo8g095300 Brassica oleracea Bo8g095300 I 0.793
Bra003422 Brassica rapa Bra003422 I 0.793
Bra007545 Brassica rapa Bra007545 I 0.793
Bra014483 Brassica rapa Bra014483 I 0.793
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.793
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.793
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.793
AZF2 Arabidopsis thaliana AT3G19580 D 0.792
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.792
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.792
Ca_05641 Cicer arietinum Ca_05641 I 0.792
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.792
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.792
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.792
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.791
30170.m013751 Ricinus communis 30170.m013751 I 0.790
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.788
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.788
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.788
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.788
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.782
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.782
28152.m000908 Ricinus communis 28152.m000908 I 0.782
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.782
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.781
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.781
mgf006006m Mimulus guttatus mgf006006m I 0.781
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.779
29661.m000908 Ricinus communis 29661.m000908 I 0.779
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.776
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.776
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.775
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.775
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.775
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.775
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.775
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.775
Ca_23672 Cicer arietinum Ca_23672 I 0.775
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.775
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.775
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.775
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.775
AZF3 Arabidopsis thaliana AT5G43170 I 0.774
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.774
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.774
ZAT6 Arabidopsis thaliana AT5G04340 D 0.773
Bo9g181170 Brassica oleracea Bo9g181170 I 0.773
Bra009464 Brassica rapa Bra009464 I 0.773
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.773
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.773
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.773
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.773
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.773
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.773
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.773
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.773
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.772
Bo7g048650 Brassica oleracea Bo7g048650 I 0.772
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.772
mgf021789m Mimulus guttatus mgf021789m I 0.771
ZAT1 Arabidopsis thaliana AT1G02030 D 0.770
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.770
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.770
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.770
ZAT4 Arabidopsis thaliana AT2G45120 D 0.769
ZAT9 Arabidopsis thaliana AT3G60580 D 0.769
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.769
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.769
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.769
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.769
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.769
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.769
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.769
OB04G28040 Oryza brachyantha OB04G28040 I 0.769
OBART04G21020 Oryza barthii OBART04G21020 I 0.769
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.769
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.769
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.769
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.769
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.769
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.769
OS04G0552700 Oryza sativa OS04G0552700 I 0.769
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.769
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.769
Si010615m.g Setaria italica Si010615m.g I 0.769
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.769
30174.m008818 Ricinus communis 30174.m008818 I 0.769
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.769
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.769
mgf017082m Mimulus guttatus mgf017082m I 0.769
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.769
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.769
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.769
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.769
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.769
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.769
Eucgr.B02394 Eucalyptus grandis Eucgr.B02394 I 0.769
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.769
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.769
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.769
Bo7g065200 Brassica oleracea Bo7g065200 I 0.768
Bra033666 Brassica rapa Bra033666 I 0.768
PRUPE_ppa012242mg Prunus persica PRUPE_ppa012242mg I 0.768
mgf021094m Mimulus guttatus mgf021094m I 0.768
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.768
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.768
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.768
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.768
evm.TU.supercontig_190.30 Carica papaya evm.TU.supercontig_190.30 I 0.767
PK27255.1 Cannabis sativa PK27255.1 I 0.767
ZAT10 Arabidopsis thaliana AT1G27730 D 0.766
Bo3g142840 Brassica oleracea Bo3g142840 I 0.766
Bra010922 Brassica rapa Bra010922 I 0.766
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.766
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.766
TCM_000780 Theobroma cacao TCM_000780 I 0.766
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I 0.765
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.764
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.763
Bo1g081350 Brassica oleracea Bo1g081350 I 0.762
Bra012914 Brassica rapa Bra012914 I 0.762
Bra029985 Brassica rapa Bra029985 I 0.762
Pm000815 Prunus mume Pm000815 I 0.762
Eucgr.B02396 Eucalyptus grandis Eucgr.B02396 I 0.762
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.762
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.760
AT5G61470 Arabidopsis thaliana AT5G61470 N 0.759
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.759
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.759
OBART02G26700 Oryza barthii OBART02G26700 I 0.759
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.759
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.759
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.759
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.759
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.759
OS02G0659500 Oryza sativa OS02G0659500 I 0.759
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.759
Bra018817 Brassica rapa Bra018817 I 0.758
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.758
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.758
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.758
MLOC_70662 Hordeum vulgare MLOC_70662 I 0.758
Si037343m.g Setaria italica Si037343m.g N 0.758
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.758
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.758
AZF1 Arabidopsis thaliana AT5G67450 D 0.757
Bo2g168030 Brassica oleracea Bo2g168030 I 0.757
Bo9g019120 Brassica oleracea Bo9g019120 I 0.757
Bra031834 Brassica rapa Bra031834 I 0.757
Bra037845 Brassica rapa Bra037845 I 0.757
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.757
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.756