ENSSTOG00000009902 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000009902 T110720_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF384
M04451_2.00 		Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA		 SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX 		0.827 1.000
ZNF384
M08306_2.00 		Homo sapiens
CTTTTTTTT
AAAAAAAAG		 ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE 		0.827 1.000
ZNF384
M08090_2.00 		Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW		 ChIP-seq
Mathelier et al.(2014)
MA1125.1 		0.827 1.000
ZNF384
M08888_2.00 		Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV		 Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C 		0.827 1.000
ZNF384
M10209_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CIZ_01 		0.827 1.000
ZNF384
M04452_2.00 		Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM		 SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000008878 C2H2 ZF 228 250
ENSSTOP00000008878 C2H2 ZF 256 278
ENSSTOP00000008878 C2H2 ZF 284 306
ENSSTOP00000008878 C2H2 ZF 317 339
ENSSTOP00000008878 C2H2 ZF 345 367
ENSSTOP00000008878 C2H2 ZF 373 397
ENSSTOP00000008878 C2H2 ZF 403 425
ENSSTOP00000008878 C2H2 ZF 433 455

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30073.m002204 Ricinus communis 30073.m002204 N
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N
Carubv10016802m.g Capsella rubella Carubv10016802m.g N
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N
mgf012242m Mimulus guttatus mgf012242m N
Cucsa.002880 Cucumis sativus Cucsa.002880 N
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N
Pm002956 Prunus mume Pm002956 N
Cla012346 Citrullus lanatus Cla012346 N
Ca_09530 Cicer arietinum Ca_09530 N
SCR Vitis vinifera VIT_08s0056g00050 N
TRIUR3_28106 Triticum urartu TRIUR3_28106 N
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N
PK22310.1 Cannabis sativa PK22310.1 N
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N
Pavir.J23622 Panicum virgatum Pavir.J23622 N
Pavir.J21588 Panicum virgatum Pavir.J21588 N
Pavir.J19041 Panicum virgatum Pavir.J19041 N
Pavir.J08573 Panicum virgatum Pavir.J08573 N
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N
MDP0000397638 Malus domestica MDP0000397638 N
Lus10040734.g Linum usitatissimum Lus10040734.g N
Lus10016496.g Linum usitatissimum Lus10016496.g N
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N
GLYMA09G40620 Glycine max GLYMA09G40620 N
OBART11G01460 Oryza barthii OBART11G01460 N
MTR_7g074650 Medicago truncatula MTR_7g074650 N
MLOC_64716 Hordeum vulgare MLOC_64716 N
LPERR12G01340 Leersia perrieri LPERR12G01340 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N
GRMZM2G131516 Zea mays GRMZM2G131516 N
GRMZM2G015080 Zea mays GRMZM2G015080 N
GLYMA18G45220 Glycine max GLYMA18G45220 N
OBART12G01190 Oryza barthii OBART12G01190 N
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N
F775_14336 Aegilops tauschii F775_14336 N
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N
Bra007056 Brassica rapa Bra007056 N
Bo8g083500 Brassica oleracea Bo8g083500 N
BGIOSGA036912 Oryza indica BGIOSGA036912 N
BGIOSGA034703 Oryza indica BGIOSGA034703 N
SCR Arabidopsis thaliana AT3G54220 N
SCR2 Oryza sativa OS12G0122000 N
TCM_017746 Theobroma cacao TCM_017746 N
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N
Sb05g001500 Sorghum bicolor Sb05g001500 N
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N
SCR1 Oryza sativa OS11G0124300 N
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N
OLONG_010321 Oryza longistaminata OLONG_010321 N
OGLUM12G01020 Oryza glumaepatula OGLUM12G01020 N
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N