mgf014333m (Mimulus guttatus)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 mgf014333m T181152_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.833 0.833
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf014333m FAR1 112 215

Links

Other FAR1 family TFs
Other Mimulus guttatus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N
Si006951m.g Setaria italica Si006951m.g N
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N
TCM_011795 Theobroma cacao TCM_011795 N
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N
Cla022217 Citrullus lanatus Cla022217 N
29736.m002027 Ricinus communis 29736.m002027 N
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N
mgf002465m Mimulus guttatus mgf002465m N
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N
Sb10g003170 Sorghum bicolor Sb10g003170 N
Carubv10010024m.g Capsella rubella Carubv10010024m.g N
Carubv10017841m.g Capsella rubella Carubv10017841m.g N
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N
MDP0000268451 Malus domestica MDP0000268451 N
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N
PK22670.1 Cannabis sativa PK22670.1 N
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N
WHY1 Arabidopsis thaliana AT1G14410 N
WHY3 Arabidopsis thaliana AT2G02740 N
BGIOSGA022297 Oryza indica BGIOSGA022297 N
Bo7g080560 Brassica oleracea Bo7g080560 N
Bo8g066030 Brassica oleracea Bo8g066030 N
Bra016702 Brassica rapa Bra016702 N
Bra024809 Brassica rapa Bra024809 N
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N
GLYMA08G40850 Glycine max GLYMA08G40850 N
GLYMA18G16200 Glycine max GLYMA18G16200 N
GRMZM2G155662 Zea mays GRMZM2G155662 N
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N
LPERR06G02670 Leersia perrieri LPERR06G02670 N
MLOC_11586 Hordeum vulgare MLOC_11586 N
OBART06G03050 Oryza barthii OBART06G03050 N
OMERI07G11550 Oryza meridionalis OMERI07G11550 N
ONIVA06G03980 Oryza nivara ONIVA06G03980 N
OPUNC06G02750 Oryza punctata OPUNC06G02750 N
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N
OS06G0145800 Oryza sativa OS06G0145800 N
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N