Cflo_10585--XP_394553.3_APIME (Camponotus floridanus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Cflo_10585--XP_394553.3_APIME T199511_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
grh
M06209_2.00 		Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK		 B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211 		0.840 0.840
grh
M10616_2.00 		Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN		 Transfac
Matys et al.(2006)
I$ELF1_01 		0.840 0.840
grh
M10617_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$GRH_01 		0.840 0.840
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_10585--XP_394553.3_APIME Grainyhead 318 535

Links

Other Grainyhead family TFs
Other Camponotus floridanus TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB13 Arabidopsis thaliana AT4G11080 D
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I
Carubv10000930m.g Capsella rubella Carubv10000930m.g I
Carubv10007590m.g Capsella rubella Carubv10007590m.g I
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I
mgf015439m Mimulus guttatus mgf015439m I
Lus10001909.g Linum usitatissimum Lus10001909.g I
Lus10003904.g Linum usitatissimum Lus10003904.g I
Lus10032379.g Linum usitatissimum Lus10032379.g I
MDP0000268093 Malus domestica MDP0000268093 I
Pavir.J07596 Panicum virgatum Pavir.J07596 I
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I
PK10992.1 Cannabis sativa PK10992.1 I
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I
HMGB6 Arabidopsis thaliana AT4G23800 I
Bo1g037180 Brassica oleracea Bo1g037180 I
Bra013731 Brassica rapa Bra013731 I
Bra035256 Brassica rapa Bra035256 I
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I
fgenesh2_kg.6__3081__AT4G11080.1 Arabidopsis lyrata fgenesh2_kg.6__3081__AT4G11080.1 I
GLYMA05G37010 Glycine max GLYMA05G37010 I
MTR_8g099305 Medicago truncatula MTR_8g099305 I
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I
Cucsa.107270 Cucumis sativus Cucsa.107270 I
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I
TCM_016416 Theobroma cacao TCM_016416 I
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I
Ca_05811 Cicer arietinum Ca_05811 I
Cla011101 Citrullus lanatus Cla011101 I
Pm024077 Prunus mume Pm024077 I
30190.m010807 Ricinus communis 30190.m010807 I
GLYMA08G02550 Glycine max GLYMA08G02550 N