orange1.1g040593m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g040593m.g T229183_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g040593m Homeodomain 265 322

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.642
Cla021272 Citrullus lanatus Cla021272 N 0.654
Pm004594 Prunus mume Pm004594 N 0.715
29848.m004652 Ricinus communis 29848.m004652 N 0.686
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.751
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.654
mgf000632m Mimulus guttatus mgf000632m N 0.643
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.747
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.697
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.710
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.710
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.867
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.732
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.650
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.687
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.633
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.633
MDP0000119866 Malus domestica MDP0000119866 N 0.715
MDP0000202143 Malus domestica MDP0000202143 N 0.736
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.677
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.699
PK00680.1 Cannabis sativa PK00680.1 N 0.759
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.743
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.609
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.609
Bo9g171420 Brassica oleracea Bo9g171420 N 0.699
Bra008975 Brassica rapa Bra008975 N 0.699
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.710
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.759
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.759
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.626
OB06G27850 Oryza brachyantha OB06G27850 N 0.629
OBART06G20210 Oryza barthii OBART06G20210 N 0.609
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.609
OCP3 Arabidopsis thaliana AT5G11270 N 0.710
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.611
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.609
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.611
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.609
OS06G0601000 Oryza sativa OS06G0601000 N 0.609
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.639
POPTR_0006s26790 Populus trichocarpa POPTR_0006s26790 N 0.622
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.715
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.646
TCM_038389 Theobroma cacao TCM_038389 N 0.732