Bo9g184660 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g184660 T267663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.800 0.886
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g184660.1 Myb 69 115
Bo9g184660.1 Myb 121 167
Bo9g184660.1 Myb 173 218

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.800
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.737
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.674
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.682
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.716
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.810
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.716
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.810
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.810
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.731
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.728
mgf019610m Mimulus guttatus mgf019610m I 0.686
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.680
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.729
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.673
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.697
29846.m000184 Ricinus communis 29846.m000184 I 0.726
Pm005124 Prunus mume Pm005124 I 0.667
Pm002704 Prunus mume Pm002704 I 0.751
Cla023357 Citrullus lanatus Cla023357 I 0.680
Cla022565 Citrullus lanatus Cla022565 I 0.673
Cla018173 Citrullus lanatus Cla018173 I 0.712
Ca_14925 Cicer arietinum Ca_14925 I 0.669
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.670
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.737
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.747
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.730
PK11664.1 Cannabis sativa PK11664.1 I 0.680
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.763
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.812
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.673
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.731
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.716
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.664
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.716
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.664
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.673
MDP0000219581 Malus domestica MDP0000219581 I 0.720
MDP0000179225 Malus domestica MDP0000179225 I 0.671
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.716
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.716
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.746
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.751
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.734
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.690
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.717
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.711
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.712
OB12G16480 Oryza brachyantha OB12G16480 I 0.664
OB01G45570 Oryza brachyantha OB01G45570 I 0.662
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.728
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.728
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.662
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.685
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.723
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.675
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.669
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.722
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.710
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.734
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.679
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.728
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.800
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.753
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.705
Bra034067 Brassica rapa Bra034067 I 0.757
Bra029762 Brassica rapa Bra029762 I 0.691
Bra009597 Brassica rapa Bra009597 I 0.861
Bo5g139340 Brassica oleracea Bo5g139340 I 0.686
Bo1g144510 Brassica oleracea Bo1g144510 I 0.757
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.688
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.721
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.721
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.721
TCM_021936 Theobroma cacao TCM_021936 I 0.731
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.700
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.661
Si021484m.g Setaria italica Si021484m.g I 0.666
Si000842m.g Setaria italica Si000842m.g I 0.716
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.716
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.751
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.751
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.671
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.671
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.733
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.700
OS12G0238000 Oryza sativa OS12G0238000 I 0.664
MYB3R-2 Oryza sativa OS01G0841500 I 0.734
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.664
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.734
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.664
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.678