Bostr.6864s0236 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.6864s0236 T285882_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.876 0.978
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.876 0.978
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.876 0.978
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.876 0.978
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.876 0.978
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.803 0.892
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.803 0.892
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.803 0.892
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.742 0.828
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.738 0.817
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.738 0.806
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.738 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.6864s0236.1.p Myb 6 52
Bostr.6864s0236.1.p Myb 58 103

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G38090 Arabidopsis thaliana AT2G38090 D
AT5G58900 Arabidopsis thaliana AT5G58900 D
PK27213.1 Cannabis sativa PK27213.1 D
PK27693.1 Cannabis sativa PK27693.1 D
Bo3g018460 Brassica oleracea Bo3g018460 I
Bo3g032160 Brassica oleracea Bo3g032160 I
Bo4g029810 Brassica oleracea Bo4g029810 I
Bo4g187390 Brassica oleracea Bo4g187390 I
Bo9g135730 Brassica oleracea Bo9g135730 I
Bra000038 Brassica rapa Bra000038 I
Bra002610 Brassica rapa Bra002610 I
Bra005139 Brassica rapa Bra005139 I
Bra006741 Brassica rapa Bra006741 I
Bra017138 Brassica rapa Bra017138 I
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I
fgenesh2_kg.8__1829__AT5G58900.1 Arabidopsis lyrata fgenesh2_kg.8__1829__AT5G58900.1 I
GLYMA01G27720 Glycine max GLYMA01G27720 I
GLYMA02G39000 Glycine max GLYMA02G39000 I
GLYMA02G42140 Glycine max GLYMA02G42140 I
GLYMA03G14440 Glycine max GLYMA03G14440 I
GLYMA07G17660 Glycine max GLYMA07G17660 I
GLYMA10G42450 Glycine max GLYMA10G42450 I
GLYMA11G22960 Glycine max GLYMA11G22960 I
GLYMA11G34930 Glycine max GLYMA11G34930 I
GLYMA14G37050 Glycine max GLYMA14G37050 I
GLYMA18G03430 Glycine max GLYMA18G03430 I
GLYMA18G07250 Glycine max GLYMA18G07250 I
GLYMA18G42530 Glycine max GLYMA18G42530 I
GLYMA20G24600 Glycine max GLYMA20G24600 I
GSMUA_Achr10G02290_001 Musa acuminata GSMUA_Achr10G02290_001 I
MTR_3g462790 Medicago truncatula MTR_3g462790 I
MTR_5g069710 Medicago truncatula MTR_5g069710 I
MTR_5g081860 Medicago truncatula MTR_5g081860 I
MTR_7g067080 Medicago truncatula MTR_7g067080 I
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I
TCM_021750 Theobroma cacao TCM_021750 I
TCM_041672 Theobroma cacao TCM_041672 I
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I
Ca_12513 Cicer arietinum Ca_12513 I
Ca_14247 Cicer arietinum Ca_14247 I
Ca_19327 Cicer arietinum Ca_19327 I
Cla004397 Citrullus lanatus Cla004397 I
Cla013553 Citrullus lanatus Cla013553 I
Cla018243 Citrullus lanatus Cla018243 I
Pm000529 Prunus mume Pm000529 I
Pm002536 Prunus mume Pm002536 I
Pm017050 Prunus mume Pm017050 I
28288.m000014 Ricinus communis 28288.m000014 I
29681.m001296 Ricinus communis 29681.m001296 I
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I
Cucsa.139090 Cucumis sativus Cucsa.139090 I
Cucsa.164580 Cucumis sativus Cucsa.164580 I
mgf022442m Mimulus guttatus mgf022442m I
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I
Bostr.26833s0356 Boechera stricta Bostr.26833s0356 I
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I
Carubv10023736m.g Capsella rubella Carubv10023736m.g I
Carubv10026903m.g Capsella rubella Carubv10026903m.g I
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I
Eucgr.J01940 Eucalyptus grandis Eucgr.J01940 I
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I
Lus10018209.g Linum usitatissimum Lus10018209.g I
Lus10040696.g Linum usitatissimum Lus10040696.g I
MDP0000142580 Malus domestica MDP0000142580 I
MDP0000221993 Malus domestica MDP0000221993 I
MDP0000243328 Malus domestica MDP0000243328 I
MDP0000255630 Malus domestica MDP0000255630 I
MDP0000292581 Malus domestica MDP0000292581 I
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I
Pavir.J16113 Panicum virgatum Pavir.J16113 I
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I
AMTR_s00029p00215750 Amborella trichopoda AMTR_s00029p00215750 N
GLYMA20G16630 Glycine max GLYMA20G16630 N
GSMUA_Achr6G33620_001 Musa acuminata GSMUA_Achr6G33620_001 N