RSKR_0001175400 (Rhabditophanes kr3021)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 RSKR_0001175400 T310148_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.811 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001175400.1 Nuclear receptor 70 139

Links

Other Nuclear receptor family TFs
Other Rhabditophanes kr3021 TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.811
Bm5457 Brugia malayi Bm5457 I 0.969
CBG03466 Caenorhabditis briggsae CBG03466 I 0.818
CBG03860 Caenorhabditis briggsae CBG03860 I 0.898
CBG04240 Caenorhabditis briggsae CBG04240 I 0.817
CBG13142 Caenorhabditis briggsae CBG13142 I 0.890
CBG14996 Caenorhabditis briggsae CBG14996 I 0.800
CBG22587 Caenorhabditis briggsae CBG22587 I 0.815
CBG22776 Caenorhabditis briggsae CBG22776 I 0.969
CBN00088 Caenorhabditis brenneri CBN00088 I 0.762
CBN04415 Caenorhabditis brenneri CBN04415 I 0.890
CBN05776 Caenorhabditis brenneri CBN05776 I 0.898
CBN08474 Caenorhabditis brenneri CBN08474 I 0.969
CBN21958 Caenorhabditis brenneri CBN21958 I 0.762
CBN24827 Caenorhabditis brenneri CBN24827 I 0.745
CBN28641 Caenorhabditis brenneri CBN28641 I 0.818
CBN32300 Caenorhabditis brenneri CBN32300 I 0.890
CJA02727 Caenorhabditis japonica CJA02727 I 0.895
CJA06107 Caenorhabditis japonica CJA06107 I 0.810
CJA14035 Caenorhabditis japonica CJA14035 I 0.969
CJA14248 Caenorhabditis japonica CJA14248 I 0.815
CJA14611 Caenorhabditis japonica CJA14611 I 0.818
CJA19445 Caenorhabditis japonica CJA19445 I 0.898
CRE00149 Caenorhabditis remanei CRE00149 I 0.748
CRE07033 Caenorhabditis remanei CRE07033 I 0.815
CRE07035 Caenorhabditis remanei CRE07035 I 0.784
CRE08264 Caenorhabditis remanei CRE08264 I 0.898
CRE09416 Caenorhabditis remanei CRE09416 I 0.774
CRE10779 Caenorhabditis remanei CRE10779 I 0.815
CRE21925 Caenorhabditis remanei CRE21925 I 0.969
CRE24933 Caenorhabditis remanei CRE24933 I 0.822
CRE26423 Caenorhabditis remanei CRE26423 I 0.890
CRE29874 Caenorhabditis remanei CRE29874 I 0.818
LOAG_07549 Loa loa LOAG_07549 I 0.969
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.753
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.969
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.846
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.818
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.969
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.876
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.810
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.898
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.887
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.969
Minc11307 Meloidogyne incognita Minc11307 I 0.963
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.818
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.818
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.956
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.819
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.819
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.819
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.968
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.748
ASU_00971 Ascaris suum ASU_00971 I 0.817
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.969
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.845
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.974
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.918
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.956
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.818
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.832
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.969
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.817
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.761
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.965
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.898
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.818
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.818
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.819
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.898
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.898
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.955
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.898
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.818
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.956
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.898
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.815
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.799
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.811
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.843
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.930
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.969
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.846
L889_g15424 Steinernema feltiae L889_g15424 I 0.920
L889_g16305 Steinernema feltiae L889_g16305 I 0.844
L889_g17247 Steinernema feltiae L889_g17247 I 0.799
L889_g25097 Steinernema feltiae L889_g25097 I 0.969
L889_g2977 Steinernema feltiae L889_g2977 I 0.808
L889_g31970 Steinernema feltiae L889_g31970 I 0.811
L889_g366 Steinernema feltiae L889_g366 I 0.822
L892_g17146 Steinernema scapterisci L892_g17146 I 0.843
L892_g17612 Steinernema scapterisci L892_g17612 I 0.748
L892_g17832 Steinernema scapterisci L892_g17832 I 0.846
L892_g186 Steinernema scapterisci L892_g186 I 0.969
L892_g23093 Steinernema scapterisci L892_g23093 I 0.815
L892_g3438 Steinernema scapterisci L892_g3438 I 0.930
L892_g4169 Steinernema scapterisci L892_g4169 I 0.763
L893_g13285 Steinernema glaseri L893_g13285 I 0.800
L893_g263 Steinernema glaseri L893_g263 I 0.811
L893_g33656 Steinernema glaseri L893_g33656 I 0.920
L893_g3565 Steinernema glaseri L893_g3565 I 0.758
L893_g5404 Steinernema glaseri L893_g5404 I 0.822
L893_g6023 Steinernema glaseri L893_g6023 I 0.969
L893_g6565 Steinernema glaseri L893_g6565 I 0.844
L898_g11608 Steinernema monticolum L898_g11608 I 0.811
L898_g18440 Steinernema monticolum L898_g18440 I 0.969
L898_g26357 Steinernema monticolum L898_g26357 I 0.799
L898_g32368 Steinernema monticolum L898_g32368 I 0.812
L898_g5338 Steinernema monticolum L898_g5338 I 0.844
L898_g9613 Steinernema monticolum L898_g9613 I 0.922
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.964
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.969
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.819
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.969
NECAME_02375 Necator americanus NECAME_02375 I 0.819
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.969
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.969
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.956
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.969
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.830
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.844
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.969
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.867
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.823
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.969
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.816
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.753
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.825
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.800
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.753
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.800
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.817
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.969
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.798
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.969
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.969
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.798
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.798
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.969
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.819
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.969
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.968
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.819
RSKR_0000426600 Rhabditophanes kr3021 RSKR_0000426600 N 0.831