BRADI4G37147 (Brachypodium distachyon)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 BRADI4G37147 T319983_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G37147.1 RWP-RK 529 577

Links

Other RWP-RK family TFs
Other Brachypodium distachyon TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_35265 Carica papaya evm.TU.contig_35265 I 0.000
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.000
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.000
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.000
MDP0000846004 Malus domestica MDP0000846004 I 0.000
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.000
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.000
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.000
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.000
Bo2g104810 Brassica oleracea Bo2g104810 I 0.000
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.000
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.000
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.000
TCM_025670 Theobroma cacao TCM_025670 I 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000
Ca_13275 Cicer arietinum Ca_13275 I 0.000
Cla005226 Citrullus lanatus Cla005226 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N 0.000
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N 0.000
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.000
Gorai.013G155300 Gossypium raimondii Gorai.013G155300 N 0.000
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N 0.000