PK16953.1 (Cannabis sativa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 PK16953.1 T323700_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK16953.1 SBP 191 265

Links

Other SBP family TFs
Other Cannabis sativa TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g141480 Brassica oleracea Bo3g141480 I 0.904
Bo5g051980 Brassica oleracea Bo5g051980 I 0.895
Bo7g049950 Brassica oleracea Bo7g049950 I 0.886
Bra030040 Brassica rapa Bra030040 I 0.890
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.945
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.933
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.935
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.957
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.966
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.966
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.967
Ca_08506 Cicer arietinum Ca_08506 I 0.910
Ca_11356 Cicer arietinum Ca_11356 I 0.967
29929.m004641 Ricinus communis 29929.m004641 I 0.980
mgf019346m Mimulus guttatus mgf019346m I 0.973
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.953
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.951
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.964
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.948
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.944
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.966
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.966
SPL2 Arabidopsis thaliana AT5G43270 N 0.978
SPL3 Oryza indica BGIOSGA007499 N 0.930
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.907
SPL12 Oryza indica BGIOSGA020577 N 0.913
Bo7g065290 Brassica oleracea Bo7g065290 N 0.979
Bo9g058970 Brassica oleracea Bo9g058970 N 0.978
Bra027478 Brassica rapa Bra027478 N 0.978
Bra033671 Brassica rapa Bra033671 N 0.978
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.920
F775_31908 Aegilops tauschii F775_31908 N 0.919
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.945
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.904
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.925
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.925
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.947
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.947
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.943
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.963
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.963
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.926
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.940
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.952
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.958
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.945
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.975
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.963
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.933
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.907
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.916
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.916
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.939
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.958
OB02G12930 Oryza brachyantha OB02G12930 N 0.930
OB02G14840 Oryza brachyantha OB02G14840 N 0.909
OB06G34330 Oryza brachyantha OB06G34330 N 0.894
OBART02G03260 Oryza barthii OBART02G03260 N 0.930
OBART06G26610 Oryza barthii OBART06G26610 N 0.913
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.907
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.913
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.913
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.930
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.930
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.907
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.913
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.930
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.898
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.913
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.927
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.907
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.912
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.930
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.907
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.913
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.930
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.907
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.913
OS02G0139400 Oryza sativa OS02G0139400 N 0.930
SPL4 Oryza sativa OS02G0174100 N 0.907
SPL12 Oryza sativa OS06G0703500 N 0.913
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.958
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.940
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.984
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.904
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.947
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.978
Si017520m.g Setaria italica Si017520m.g N 0.891
Si017749m.g Setaria italica Si017749m.g N 0.925
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.938
TCM_008772 Theobroma cacao TCM_008772 N 0.976
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.916
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.916
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.916
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.919
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.916
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.916
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.964
Pm007020 Prunus mume Pm007020 N 0.983
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.970
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.971
mgf010397m Mimulus guttatus mgf010397m N 0.960
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.974
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.977
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.977
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.983
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.972
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.938
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.944
MDP0000155354 Malus domestica MDP0000155354 N 0.983
MDP0000249364 Malus domestica MDP0000249364 N 0.932
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.983
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.889
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.889
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.927
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.927
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.940
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.978
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.956
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.972