Pm006558 (Prunus mume)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Pm006558 T350592_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm006558 Whirly 98 233

Links

Other Whirly family TFs
Other Prunus mume TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.875
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.868
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.824
mgf002465m Mimulus guttatus mgf002465m N 0.809
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.765
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.853
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.853
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.875
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.868
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.853
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.875
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.860
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.875
29736.m002027 Ricinus communis 29736.m002027 N 0.838
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.846
MDP0000268451 Malus domestica MDP0000268451 N 0.971
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.875
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.713
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.713
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.801
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.860
PK22670.1 Cannabis sativa PK22670.1 N 0.890
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.792
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.732
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.720
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.772
WHY1 Arabidopsis thaliana AT1G14410 N 0.868
WHY3 Arabidopsis thaliana AT2G02740 N 0.868
Bo7g080560 Brassica oleracea Bo7g080560 N 0.860
Bo8g066030 Brassica oleracea Bo8g066030 N 0.846
Bra016702 Brassica rapa Bra016702 N 0.853
Bra024809 Brassica rapa Bra024809 N 0.875
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.713
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.868
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.868
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.750
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.765
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.713
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.721
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.846
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.794
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.772
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 1.000
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.721
Si006951m.g Setaria italica Si006951m.g N 0.713
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.838
TCM_011795 Theobroma cacao TCM_011795 N 0.853
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.868
Ca_24297 Cicer arietinum Ca_24297 N 0.721
Cla022217 Citrullus lanatus Cla022217 N 0.860