Pavir.J14128 (Panicum virgatum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Pavir.J14128 T351741_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.837 0.837
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J14128.1.p WRC 90 132

Links

Other WRC family TFs
Other Panicum virgatum TFs

552 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hmg20b Mus musculus ENSMUSG00000020232 D 0.000
Sox17 Mus musculus ENSMUSG00000025902 D 0.000
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.000
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.000
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.000
SOX10 Echinops telfairi ENSETEG00000012633 I 0.000
SOX9 Echinops telfairi ENSETEG00000020237 I 0.000
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.000
SOX2 Felis catus ENSFCAG00000029205 I 0.000
SOX8 Microcebus murinus ENSMICG00000011516 I 0.000
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.000
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.000
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.000
SOX2 Procavia capensis ENSPCAG00000003690 I 0.000
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.000
SOX17 Sorex araneus ENSSARG00000009573 I 0.000
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.000
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.000
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.000
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.000
MESCA012239 Megaselia scalaris MESCA012239 I 0.000
sox-2 Caenorhabditis elegans WBGene00004949 I 0.000
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.000
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.000
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.000
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.000
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.000
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.000
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.000
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.000
AAEL000771 Aedes aegypti AAEL000771 N 0.000
ACEP10857 Atta cephalotes ACEP10857 N 0.000
ACEP25851 Atta cephalotes ACEP25851 N 0.000
AGAP028091 Anopheles gambiae AGAP028091 N 0.000
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.000
CBN25334 Caenorhabditis brenneri CBN25334 N 0.000
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.000
CNM02020 Cryptococcus neoformans CNM02020 N 0.000
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.000
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.000
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.000
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.000
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.000
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.000
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.000
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.000
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.000
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.000
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.000
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.000
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.000
SOX18 Echinops telfairi ENSETEG00000001816 N 0.000
SOX8 Echinops telfairi ENSETEG00000015470 N 0.000
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.000
SOX8 Felis catus ENSFCAG00000004219 N 0.000
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.000
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.000
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.000
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.000
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.000
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.000
SOX18 Procavia capensis ENSPCAG00000015663 N 0.000
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.000
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.000
BBX Sorex araneus ENSSARG00000008353 N 0.000
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.000
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.000
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.000
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.000
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.000
F443_09320 Phytophthora parasitica F443_09320 N 0.000
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.000
GB40963 Apis mellifera GB40963 N 0.000
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.000
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.000
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.000
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.000
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.000
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.000
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.000
HelroG68905 Helobdella robusta HelroG68905 N 0.000
HMEL013676 Heliconius melpomene HMEL013676 N 0.000
ISCW001638 Ixodes scapularis ISCW001638 N 0.000
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.000
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.000
L798_00185 Zootermopsis nevadensis L798_00185 N 0.000
L798_05432 Zootermopsis nevadensis L798_05432 N 0.000
L798_12046 Zootermopsis nevadensis L798_12046 N 0.000
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.000
LotgiG143673 Lottia gigantea LotgiG143673 N 0.000
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.000
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.000
MESCA006364 Megaselia scalaris MESCA006364 N 0.000
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.000
PHUM433280 Pediculus humanus PHUM433280 N 0.000
Phyra76615 Phytophthora ramorum Phyra76615 N 0.000
Physo127875 Phytophthora sojae Physo127875 N 0.000
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.000
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.000
PPA11045 Pristionchus pacificus PPA11045 N 0.000
RPRC001038 Rhodnius prolixus RPRC001038 N 0.000
RPRC013413 Rhodnius prolixus RPRC013413 N 0.000
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.000
SINV16572 Solenopsis invicta SINV16572 N 0.000
SINV19749 Solenopsis invicta SINV19749 N 0.000
SINV24165 Solenopsis invicta SINV24165 N 0.000
SMAR007058 Strigamia maritima SMAR007058 N 0.000
SMAR010125 Strigamia maritima SMAR010125 N 0.000
TC009856 Tribolium castaneum TC009856 N 0.000
UCREL1_237 Eutypa lata UCREL1_237 N 0.000
UCREL1_749 Eutypa lata UCREL1_749 N 0.000
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.000
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.000
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.000
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.000
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.000
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.000
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.000
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.000
Aan_R006397 Calypte anna Aan_R006397 N 0.000
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.000
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.000
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.000
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.000
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.000
Cla016375 Citrullus lanatus Cla016375 N 0.000
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.000
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.000
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.000
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.000
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.000
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.000
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.000
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.000
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.000
yakG000714 Bos grunniens yakG000714 N 0.000
67303 Aureococcus anophagefferens 67303 N 0.000
68433 Aureococcus anophagefferens 68433 N 0.000
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.000
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.000
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.000
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.000
CLEC006960 Cimex lectularius CLEC006960 N 0.000
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.000
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.000
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.000
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.000
LCUP001586 Lucilia cuprina LCUP001586 N 0.000
LDEC007550 Leptinotarsa decemlineata LDEC007550 N 0.000
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.000
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.000
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.000
PK00252.1 Cannabis sativa PK00252.1 N 0.000
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.000
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.000
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.000
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.000
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.000
Minc18937 Meloidogyne incognita Minc18937 N 0.000
AALB009772 Anopheles albimanus AALB009772 N 0.000
AALB009867 Anopheles albimanus AALB009867 N 0.000
AARA000825 Anopheles arabiensis AARA000825 N 0.000
AATE015714 Anopheles atroparvus AATE015714 N 0.000
AATE016483 Anopheles atroparvus AATE016483 N 0.000
ACOM022799 Anopheles coluzzii ACOM022799 N 0.000
ACOM026653 Anopheles coluzzii ACOM026653 N 0.000
ACUA008827 Anopheles culicifacies ACUA008827 N 0.000
ACUA010594 Anopheles culicifacies ACUA010594 N 0.000
ACUA012732 Anopheles culicifacies ACUA012732 N 0.000
ADIR005631 Anopheles dirus ADIR005631 N 0.000
ADIR009661 Anopheles dirus ADIR009661 N 0.000
AEPI003629 Anopheles epiroticus AEPI003629 N 0.000
AEPI007652 Anopheles epiroticus AEPI007652 N 0.000
AEPI007948 Anopheles epiroticus AEPI007948 N 0.000
AFUN006689 Anopheles funestus AFUN006689 N 0.000
AFUN010198 Anopheles funestus AFUN010198 N 0.000
AMAM004028 Anopheles maculatus AMAM004028 N 0.000
AMAM023617 Anopheles maculatus AMAM023617 N 0.000
AMEC007393 Anopheles melas AMEC007393 N 0.000
AMEC011653 Anopheles melas AMEC011653 N 0.000
AMEM002834 Anopheles merus AMEM002834 N 0.000
AMEM007694 Anopheles merus AMEM007694 N 0.000
AMIN001220 Anopheles minimus AMIN001220 N 0.000
AMIN009302 Anopheles minimus AMIN009302 N 0.000
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.000
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.000
ASIS001889 Anopheles sinensis ASIS001889 N 0.000
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.000
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.000
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.000
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.000
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.000
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.000
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.000
ANCCEY_05358 Ancylostoma ceylanicum ANCCEY_05358 N 0.000
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.000
D918_08317 Trichuris suis D918_08317 N 0.000
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.000
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.000
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.000
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.000
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.000
L898_g4879 Steinernema monticolum L898_g4879 N 0.000
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.000
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.000
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.000
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.000
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.000
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.000