GALMADRAFT_96046 (Galerina marginata)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GALMADRAFT_96046 T369265_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_67234
M01419_2.00 		Schizophyllum commune
BATCGGAV
BTCCGATV		 PBM
Lambert et al.(2019)
pTH9776 		0.581 0.781
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR77286 Zinc cluster 26 59

Links

Other Zinc cluster family TFs
Other Galerina marginata TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2F Arabidopsis thaliana AT3G57600 D
DREB2G Arabidopsis thaliana AT5G18450 D
PK08602.1 Cannabis sativa PK08602.1 D
cassava39243.m1 Manihot esculenta cassava39243.m1 I
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I
Carubv10017800m.g Capsella rubella Carubv10017800m.g I
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I
mgf017629m Mimulus guttatus mgf017629m I
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I
Cucsa.336890 Cucumis sativus Cucsa.336890 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
cassava15495.m1 Manihot esculenta cassava15495.m1 I
27810.m000639 Ricinus communis 27810.m000639 I
Pm025865 Prunus mume Pm025865 I
Ca_07264 Cicer arietinum Ca_07264 I
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I
TCM_024756 Theobroma cacao TCM_024756 I
MDP0000871361 Malus domestica MDP0000871361 I
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I
MDP0000703626 Malus domestica MDP0000703626 I
Lus10012210.g Linum usitatissimum Lus10012210.g I
Lus10011319.g Linum usitatissimum Lus10011319.g I
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I
Bra014617 Brassica rapa Bra014617 I
GRMZM2G376255 Zea mays GRMZM2G376255 I
GLYMA19G32380 Glycine max GLYMA19G32380 I
GLYMA19G04461 Glycine max GLYMA19G04461 I
GLYMA14G32210 Glycine max GLYMA14G32210 I
GLYMA10G21850 Glycine max GLYMA10G21850 I
GLYMA03G29530 Glycine max GLYMA03G29530 I
GLYMA02G31350 Glycine max GLYMA02G31350 I
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I
GRMZM2G399098 Zea mays GRMZM2G399098 I
Bra007341 Brassica rapa Bra007341 I
Bra002159 Brassica rapa Bra002159 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bo8g092010 Brassica oleracea Bo8g092010 I
Bo6g073020 Brassica oleracea Bo6g073020 I
Bo4g111040 Brassica oleracea Bo4g111040 I
BGIOSGA011963 Oryza indica BGIOSGA011963 I
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I
DREB2E Oryza sativa OS03G0174400 I
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I
OPUNC03G05230 Oryza punctata OPUNC03G05230 I
ONIVA03G05350 Oryza nivara ONIVA03G05350 I
OMERI03G05220 Oryza meridionalis OMERI03G05220 I
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I
OBART03G05550 Oryza barthii OBART03G05550 I
MTR_7g092190 Medicago truncatula MTR_7g092190 I
LPERR03G04860 Leersia perrieri LPERR03G04860 I
GRMZM2G419901 Zea mays GRMZM2G419901 I