BHLH104 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT4G14410 T030670_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00		 Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365		 (Direct) (Direct)
BHLH104
M06737_2.00		 Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01706_2.00 bHLH 51 100

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G14410.1 bHLH 133 182
AT4G14410.2 bHLH 127 176
AT4G14410.3 bHLH 127 176

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.914
Bo1g102270 Brassica oleracea Bo1g102270 I 0.856
Bo4g126940 Brassica oleracea Bo4g126940 I 0.891
Bo7g040830 Brassica oleracea Bo7g040830 I 0.856
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.914
Bra014923 Brassica rapa Bra014923 I 0.856
Bra041033 Brassica rapa Bra041033 I 0.911
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.914
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.914
Ca_23174 Cicer arietinum Ca_23174 I 0.878
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I 0.846
Cla021854 Citrullus lanatus Cla021854 I 0.857
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.857
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.859
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.856
GLYMA10G01010 Glycine max GLYMA10G01010 I 0.842
GLYMA20G22010 Glycine max GLYMA20G22010 I 0.842
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.844
Lus10022186.g Linum usitatissimum Lus10022186.g I 0.857
MTR_1g043430 Medicago truncatula MTR_1g043430 I 0.878
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I 0.846
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.846
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.842
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.914