Cmyd_10014727 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10014727 T134402_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014727 C2H2 ZF 185 209
Cmyd_10014727 C2H2 ZF 246 270

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000926 Ricinus communis 29661.m000926 I 0.000
29812.m000204 Ricinus communis 29812.m000204 I 0.000
29912.m005376 Ricinus communis 29912.m005376 I 0.000
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.000
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.000
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I 0.000
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I 0.000
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I 0.000
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.000
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.000
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.000
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.000
Bo1g081300 Brassica oleracea Bo1g081300 I 0.000
Bo3g096520 Brassica oleracea Bo3g096520 I 0.000
Bo3g184590 Brassica oleracea Bo3g184590 I 0.000
Bo5g077530 Brassica oleracea Bo5g077530 I 0.000
Bo6g018740 Brassica oleracea Bo6g018740 I 0.000
Bo9g019040 Brassica oleracea Bo9g019040 I 0.000
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.000
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.000
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.000
Bra018818 Brassica rapa Bra018818 I 0.000
Bra024438 Brassica rapa Bra024438 I 0.000
Bra029978 Brassica rapa Bra029978 I 0.000
Bra030894 Brassica rapa Bra030894 I 0.000
Bra037837 Brassica rapa Bra037837 I 0.000
Bra037839 Brassica rapa Bra037839 I 0.000
Bra039650 Brassica rapa Bra039650 I 0.000
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.000
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.000
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.000
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.000
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.000
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.000
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.000
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.000
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.000
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.000
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I 0.000
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I 0.000
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.000
Ca_02232 Cicer arietinum Ca_02232 I 0.000
Ca_02722 Cicer arietinum Ca_02722 I 0.000
Ca_08043 Cicer arietinum Ca_08043 I 0.000
Ca_09355 Cicer arietinum Ca_09355 I 0.000
Ca_10058 Cicer arietinum Ca_10058 I 0.000
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.000
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.000
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.000
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.000
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.000
Cla006547 Citrullus lanatus Cla006547 I 0.000
Cla014248 Citrullus lanatus Cla014248 I 0.000
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.000
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.000
estExt_fgenesh1_pg.C_Chr_13.00010057 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_13.00010057 D 0.000
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.000
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.000
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.000
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.000
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.000
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.000
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.000
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.000
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.000
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.000
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.000
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.000
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.000
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.000
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.000
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.000
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.000
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.000
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.000
GRMZM2G095239 Zea mays GRMZM2G095239 N 0.000
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.000
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I 0.000
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.000
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.000
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.000
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.000
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.000
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.000
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.000
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.000
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.000
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.000
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.000
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.000
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.000
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.000
Lus10012092.g Linum usitatissimum Lus10012092.g I 0.000
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.000
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.000
Lus10025203.g Linum usitatissimum Lus10025203.g I 0.000
Lus10027621.g Linum usitatissimum Lus10027621.g I 0.000
Lus10030935.g Linum usitatissimum Lus10030935.g I 0.000
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.000
Lus10040111.g Linum usitatissimum Lus10040111.g I 0.000
MDP0000234807 Malus domestica MDP0000234807 I 0.000
MDP0000239354 Malus domestica MDP0000239354 I 0.000
mgf000125m Mimulus guttatus mgf000125m I 0.000
mgf004823m Mimulus guttatus mgf004823m I 0.000
mgf009594m Mimulus guttatus mgf009594m I 0.000
mgf010975m Mimulus guttatus mgf010975m I 0.000
mgf011386m Mimulus guttatus mgf011386m I 0.000
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.000
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.000
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.000
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.000
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.000
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.000
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.000
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.000
OB01G30760 Oryza brachyantha OB01G30760 I 0.000
OB12G25520 Oryza brachyantha OB12G25520 I 0.000
OBART01G21150 Oryza barthii OBART01G21150 I 0.000
OBART12G18680 Oryza barthii OBART12G18680 I 0.000
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.000
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.000
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.000
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.000
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.000
OMERI12G14000 Oryza meridionalis OMERI12G14000 I 0.000
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.000
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.000
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.000
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.000
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.000
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.000
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.000
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.000
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.000
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.000
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.000
OS01G0589300 Oryza sativa OS01G0589300 I 0.000
OS12G0613300 Oryza sativa OS12G0613300 I 0.000
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.000
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.000
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.000
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N 0.000
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N 0.000
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.000
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.000
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.000
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.000
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.000
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.000
PK06103.1 Cannabis sativa PK06103.1 D 0.000
PK19870.1 Cannabis sativa PK19870.1 I 0.000
Pm002374 Prunus mume Pm002374 I 0.000
Pm021139 Prunus mume Pm021139 I 0.000
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.000
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.000
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.000
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.000
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.000
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.000
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.000
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.000
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.000
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.000
Sb01g013670 Sorghum bicolor Sb01g013670 N 0.000
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.000
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.000
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.000
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.000
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.000
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I 0.000
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I 0.000
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.000
Si002467m.g Setaria italica Si002467m.g I 0.000
Si036471m.g Setaria italica Si036471m.g N 0.000
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I 0.000
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.000
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.000
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.000
TCM_000807 Theobroma cacao TCM_000807 I 0.000
TCM_007242 Theobroma cacao TCM_007242 I 0.000
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.000
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.000
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.000
Thhalv10011866m.g Eutrema salsugineum Thhalv10011866m.g I 0.000
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I 0.000
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.000
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.000
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.000
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.000
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.000
TRB1 Arabidopsis thaliana AT1G49950 D 0.000
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.000
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.000
TRB2 Arabidopsis thaliana AT5G67580 D 0.000
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.000
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.000
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.000
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.000
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.000