chr1.CM0318.720.nd (Lotus japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 chr1.CM0318.720.nd T146050_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0318.720.nd C2H2 ZF 264 285
chr1.CM0318.720.nd C2H2 ZF 284 310

Links

Other C2H2 ZF family TFs
Other Lotus japonicus TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.827
30055.m001542 Ricinus communis 30055.m001542 N 0.772
30061.m000294 Ricinus communis 30061.m000294 N 0.791
30169.m006417 Ricinus communis 30169.m006417 N 0.811
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.827
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.793
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.793
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.774
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.772
Bo4g111000 Brassica oleracea Bo4g111000 N 0.827
Bo5g015200 Brassica oleracea Bo5g015200 N 0.787
Bo6g073120 Brassica oleracea Bo6g073120 N 0.827
Bo8g092070 Brassica oleracea Bo8g092070 N 0.827
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.787
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.827
Bra003295 Brassica rapa Bra003295 N 0.827
Bra007346 Brassica rapa Bra007346 N 0.825
Bra014612 Brassica rapa Bra014612 N 0.827
Bra019822 Brassica rapa Bra019822 N 0.787
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.787
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.772
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.827
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.787
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.787
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.827
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.772
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.772
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.806
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.827
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.797
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.827
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.793
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.818
Ca_07269 Cicer arietinum Ca_07269 N 0.827
Ca_08435 Cicer arietinum Ca_08435 N 0.793
Ca_21713 Cicer arietinum Ca_21713 N 0.811
Ca_24699 Cicer arietinum Ca_24699 N 0.793
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.793
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.827
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.821
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.772
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.784
Cla002714 Citrullus lanatus Cla002714 N 0.793
Cla008187 Citrullus lanatus Cla008187 N 0.827
Cla008675 Citrullus lanatus Cla008675 N 0.797
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.827
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.793
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.827
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.793
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.827
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.793
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.772
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.811
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.772
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.793
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.827
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.811
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.784
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.827
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.821
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.772
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.793
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.793
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.827
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.791
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.787
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.772
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.772
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.772
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.791
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.791
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.772
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.791
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.827
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.787
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.772
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.827
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.827
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.772
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.821
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.793
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.811
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.811
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.772
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.787
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.787
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.797
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.818
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.811
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.778
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.791
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.827
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.821
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.811
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.787
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.772
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.793
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.802
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.802
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.793
MDP0000131949 Malus domestica MDP0000131949 N 0.772
MDP0000300013 Malus domestica MDP0000300013 N 0.772
MDP0000303483 Malus domestica MDP0000303483 N 0.793
MDP0000403797 Malus domestica MDP0000403797 N 0.821
MDP0000580545 Malus domestica MDP0000580545 N 0.821
MDP0000601705 Malus domestica MDP0000601705 N 0.827
MDP0000899280 Malus domestica MDP0000899280 N 0.784
mgf019910m Mimulus guttatus mgf019910m N 0.797
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.772
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.811
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.793
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.827
NTT Vitis vinifera VIT_08s0007g08070 N 0.827
OB06G28740 Oryza brachyantha OB06G28740 N 0.787
OBART06G20890 Oryza barthii OBART06G20890 N 0.811
OBART09G03640 Oryza barthii OBART09G03640 N 0.774
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.787
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.774
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.772
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.774
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.772
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.774
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.787
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.772
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.787
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.774
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.772
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.821
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.772
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.827
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.784
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.787
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.774
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.787
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.774
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.772
OS02G0196100 Oryza sativa OS02G0196100 N 0.000
OS06G0612300 Oryza sativa OS06G0612300 N 0.787
OS09G0307400 Oryza sativa OS09G0307400 N 0.772
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.772
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.787
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.821
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.827
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.803
PK03705.1 Cannabis sativa PK03705.1 N 0.827
Pm000471 Prunus mume Pm000471 N 0.821
Pm001374 Prunus mume Pm001374 N 0.772
Pm025853 Prunus mume Pm025853 N 0.827
Pm029018 Prunus mume Pm029018 N 0.793
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.797
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.811
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.772
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.797
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.772
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.793
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.827
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.827
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.793
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.772
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.821
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.811
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.827
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.772
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.772
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.787
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.811
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.811
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.787
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.787
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.793
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.793
Si006616m.g Setaria italica Si006616m.g N 0.787
Si030360m.g Setaria italica Si030360m.g N 0.772
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.803
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.821
TCM_005892 Theobroma cacao TCM_005892 N 0.797
TCM_011858 Theobroma cacao TCM_011858 N 0.793
TCM_024788 Theobroma cacao TCM_024788 N 0.827
TCM_040610 Theobroma cacao TCM_040610 N 0.811
TCM_041441 Theobroma cacao TCM_041441 N 0.772
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.827
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.787
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.772
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.772
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.811
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.811
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.772
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.797
WIP2 Arabidopsis thaliana AT3G57670 N 0.827
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.772
WIP6 Arabidopsis thaliana AT1G13290 N 0.787