BGIOSGA003725 (Oryza indica)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 BGIOSGA003725 T164281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA003725-PA CSD 6 72

Links

Other CSD family TFs
Other Oryza indica TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003500 Ricinus communis 29822.m003500 I
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I
ATHB-12 Arabidopsis thaliana AT3G61890 D
ATHB-12 Arabidopsis lyrata fgenesh2_kg.5__2686__AT3G61890.1 I
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I
ATHB-52 Arabidopsis thaliana AT5G53980 I
ATHB-7 Arabidopsis thaliana AT2G46680 D
ATHB52 Arabidopsis lyrata fgenesh2_kg.8__1293__AT5G53980.1 I
Bo2g012410 Brassica oleracea Bo2g012410 I
Bo2g042250 Brassica oleracea Bo2g042250 I
Bo3g010120 Brassica oleracea Bo3g010120 I
Bo4g007060 Brassica oleracea Bo4g007060 I
Bo4g100070 Brassica oleracea Bo4g100070 I
Bo8g097390 Brassica oleracea Bo8g097390 I
Bo9g165360 Brassica oleracea Bo9g165360 I
Bostr.13158s0194 Boechera stricta Bostr.13158s0194 I
Bostr.25993s0098 Boechera stricta Bostr.25993s0098 I
Bostr.26833s0878 Boechera stricta Bostr.26833s0878 I
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I
Bra004516 Brassica rapa Bra004516 I
Bra006285 Brassica rapa Bra006285 I
Bra008717 Brassica rapa Bra008717 I
Bra014417 Brassica rapa Bra014417 I
Bra022687 Brassica rapa Bra022687 I
Bra023506 Brassica rapa Bra023506 I
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I
Cagra.0050s0032 Capsella grandiflora Cagra.0050s0032 I
Cagra.0483s0055 Capsella grandiflora Cagra.0483s0055 I
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I
Cagra.4622s0007 Capsella grandiflora Cagra.4622s0007 I
Carubv10001498m.g Capsella rubella Carubv10001498m.g I
Carubv10017952m.g Capsella rubella Carubv10017952m.g I
Carubv10023896m.g Capsella rubella Carubv10023896m.g I
Carubv10027280m.g Capsella rubella Carubv10027280m.g I
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I
cassava39955.m1 Manihot esculenta cassava39955.m1 I
Ca_10527 Cicer arietinum Ca_10527 I
Ca_17608 Cicer arietinum Ca_17608 I
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I
Cla010510 Citrullus lanatus Cla010510 I
Cla018641 Citrullus lanatus Cla018641 I
Cucsa.125070 Cucumis sativus Cucsa.125070 I
Cucsa.158420 Cucumis sativus Cucsa.158420 I
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I
Eucgr.I02255 Eucalyptus grandis Eucgr.I02255 I
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I
evm.TU.supercontig_80.1 Carica papaya evm.TU.supercontig_80.1 I
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I
GLYMA06G35050 Glycine max GLYMA06G35050 I
GLYMA09G37410 Glycine max GLYMA09G37410 I
GLYMA12G18720 Glycine max GLYMA12G18720 I
GLYMA18G49290 Glycine max GLYMA18G49290 I
GLYMA19G02490 Glycine max GLYMA19G02490 I
Gorai.002G067100 Gossypium raimondii Gorai.002G067100 I
Gorai.002G244000 Gossypium raimondii Gorai.002G244000 I
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I
GRMZM2G034113 Zea mays GRMZM2G034113 I
GRMZM2G041462 Zea mays GRMZM2G041462 I
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I
HAT7 Arabidopsis thaliana AT5G15150 I
LjSGA_022706.2 Lotus japonicus LjSGA_022706.2 I
MDP0000124827 Malus domestica MDP0000124827 I
MDP0000146339 Malus domestica MDP0000146339 I
MDP0000311522 Malus domestica MDP0000311522 I
MDP0000316497 Malus domestica MDP0000316497 I
MDP0000737128 Malus domestica MDP0000737128 I
MTR_1g061660 Medicago truncatula MTR_1g061660 I
MTR_6g011610 Medicago truncatula MTR_6g011610 I
MTR_8g026960 Medicago truncatula MTR_8g026960 I
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I
PGSC0003DMG400005472 Solanum tuberosum PGSC0003DMG400005472 I
PGSC0003DMG400018509 Solanum tuberosum PGSC0003DMG400018509 I
PK03912.1 Cannabis sativa PK03912.1 I
PK20392.1 Cannabis sativa PK20392.1 D
Pm011328 Prunus mume Pm011328 I
Pm015861 Prunus mume Pm015861 I
Pm018314 Prunus mume Pm018314 I
Pm019693 Prunus mume Pm019693 I
POPTR_0001s40540 Populus trichocarpa POPTR_0001s40540 I
POPTR_0011s11510 Populus trichocarpa POPTR_0011s11510 I
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I
PRUPE_ppa011221mg Prunus persica PRUPE_ppa011221mg I
PRUPE_ppa017711mg Prunus persica PRUPE_ppa017711mg I
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I
Q39944_HELAN Helianthus annuus Q39944_HELAN D
SapurV1A.0207s0080 Salix purpurea SapurV1A.0207s0080 I
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I
Sb02g030660 Sorghum bicolor Sb02g030660 I
scaffold_403638.1 Arabidopsis lyrata scaffold_403638.1 I
scaffold_403640.1 Arabidopsis lyrata scaffold_403640.1 I
Si030983m.g Setaria italica Si030983m.g I
Solyc03g082550.2 Solanum lycopersicum Solyc03g082550.2 I
Solyc06g053220.2 Solanum lycopersicum Solyc06g053220.2 I
TCM_018470 Theobroma cacao TCM_018470 I
TCM_031644 Theobroma cacao TCM_031644 I
Thhalv10001600m.g Eutrema salsugineum Thhalv10001600m.g I
Thhalv10006221m.g Eutrema salsugineum Thhalv10006221m.g I
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I
Thhalv10014905m.g Eutrema salsugineum Thhalv10014905m.g I
VIT_08s0007g04200 Vitis vinifera VIT_08s0007g04200 I
VIT_16s0098g01170 Vitis vinifera VIT_16s0098g01170 I
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I
VIT_19s0014g02110 Vitis vinifera VIT_19s0014g02110 I