Ca_17608 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_17608 T225462_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q39944_HELAN
M10802_2.00 		Helianthus annuus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HAHB4_01 		0.697 0.702
ATHB-12
M00865_2.00 		Arabidopsis thaliana
NNNNNNNN
NNNNNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATHB12 		0.683 0.807
ATHB-12
M02045_2.00 		Arabidopsis thaliana
BHWWWWWWDV
BHWWWWWWDV		 PBM
Weirauch et al.(2014)
pTH7207 		0.683 0.807
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.601 0.596
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.601 0.596
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_17608 Homeodomain 32 88

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_8g026960 Medicago truncatula MTR_8g026960 I 0.867
MDP0000316497 Malus domestica MDP0000316497 I 0.770
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I 0.740
Pm018314 Prunus mume Pm018314 I 0.740
GRMZM2G041462 Zea mays GRMZM2G041462 I 0.739
Sb02g030660 Sorghum bicolor Sb02g030660 I 0.739
Si030983m.g Setaria italica Si030983m.g I 0.739
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I 0.739
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I 0.739
Bo4g100070 Brassica oleracea Bo4g100070 I 0.710
Thhalv10006221m.g Eutrema salsugineum Thhalv10006221m.g I 0.710
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I 0.707
MDP0000311522 Malus domestica MDP0000311522 I 0.706
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I 0.702
Q39944_HELAN Helianthus annuus Q39944_HELAN D 0.697
Bra014417 Brassica rapa Bra014417 I 0.695
GRMZM2G034113 Zea mays GRMZM2G034113 I 0.693
GLYMA07G05800 Glycine max GLYMA07G05800 I 0.686
ATHB-12 Arabidopsis thaliana AT3G61890 D 0.683
Bo8g097390 Brassica oleracea Bo8g097390 I 0.683
Bra007637 Brassica rapa Bra007637 I 0.683
ATHB-12 Arabidopsis lyrata fgenesh2_kg.5__2686__AT3G61890.1 I 0.683
Bostr.13158s0194 Boechera stricta Bostr.13158s0194 I 0.683
Cagra.0483s0055 Capsella grandiflora Cagra.0483s0055 I 0.683
Carubv10017952m.g Capsella rubella Carubv10017952m.g I 0.683
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I 0.669
MDP0000899816 Malus domestica MDP0000899816 I 0.669
PGSC0003DMG400018509 Solanum tuberosum PGSC0003DMG400018509 I 0.661
Solyc03g082550.2 Solanum lycopersicum Solyc03g082550.2 I 0.661
GLYMA16G02390 Glycine max GLYMA16G02390 I 0.660
Carubv10003464m.g Capsella rubella Carubv10003464m.g I 0.646
POPTR_0002s17680 Populus trichocarpa POPTR_0002s17680 I 0.639
27964.m000347 Ricinus communis 27964.m000347 I 0.639
SapurV1A.0003s0740 Salix purpurea SapurV1A.0003s0740 I 0.639
SapurV1A.0162s0050 Salix purpurea SapurV1A.0162s0050 I 0.639
MDP0000615948 Malus domestica MDP0000615948 I 0.637
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I 0.636
GLYMA06G35050 Glycine max GLYMA06G35050 I 0.634
Gorai.007G111400 Gossypium raimondii Gorai.007G111400 I 0.634
POPTR_0014s09860 Populus trichocarpa POPTR_0014s09860 I 0.631
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I 0.630
TCM_005074 Theobroma cacao TCM_005074 I 0.630
evm.TU.supercontig_144.7 Carica papaya evm.TU.supercontig_144.7 I 0.630
VIT_16s0098g01170 Vitis vinifera VIT_16s0098g01170 I 0.626
Gorai.002G244000 Gossypium raimondii Gorai.002G244000 I 0.623
PGSC0003DMG400031777 Solanum tuberosum PGSC0003DMG400031777 I 0.619
Solyc02g077590.1 Solanum lycopersicum Solyc02g077590.1 I 0.619
VIT_19s0014g02110 Vitis vinifera VIT_19s0014g02110 I 0.619
Al_scaffold_0006_290 Arabidopsis lyrata Al_scaffold_0006_290 I 0.616
Ciclev10012525m.g Citrus clementina Ciclev10012525m.g I 0.615
orange1.1g040769m.g Citrus sinensis orange1.1g040769m.g I 0.615
Bostr.2128s0069 Boechera stricta Bostr.2128s0069 I 0.614
Cagra.0463s0004 Capsella grandiflora Cagra.0463s0004 I 0.614
Thhalv10015784m.g Eutrema salsugineum Thhalv10015784m.g I 0.614
Solyc03g034120.2 Solanum lycopersicum Solyc03g034120.2 I 0.613
Bostr.23794s0432 Boechera stricta Bostr.23794s0432 I 0.612
Cagra.0228s0052 Capsella grandiflora Cagra.0228s0052 I 0.612
Carubv10024148m.g Capsella rubella Carubv10024148m.g I 0.612
MTR_1g061660 Medicago truncatula MTR_1g061660 I 0.609
PGSC0003DMG400005472 Solanum tuberosum PGSC0003DMG400005472 I 0.609
Solyc06g053220.2 Solanum lycopersicum Solyc06g053220.2 I 0.609
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I 0.608
Cagra.0050s0032 Capsella grandiflora Cagra.0050s0032 I 0.607
Carubv10023896m.g Capsella rubella Carubv10023896m.g I 0.607
Thhalv10001600m.g Eutrema salsugineum Thhalv10001600m.g I 0.607
ATHB22 Arabidopsis lyrata Al_scaffold_0004_2163 I 0.606
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I 0.606
Ciclev10021877m.g Citrus clementina Ciclev10021877m.g I 0.606
orange1.1g025886m.g Citrus sinensis orange1.1g025886m.g I 0.606
evm.TU.supercontig_80.1 Carica papaya evm.TU.supercontig_80.1 I 0.603
cassava29430.valid.m1 Manihot esculenta cassava29430.valid.m1 I 0.602
cassava29431.valid.m1 Manihot esculenta cassava29431.valid.m1 I 0.602
Gorai.001G152200 Gossypium raimondii Gorai.001G152200 I 0.602
GLYMA19G02490 Glycine max GLYMA19G02490 I 0.601
MTR_6g011610 Medicago truncatula MTR_6g011610 I 0.601
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I 0.601
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I 0.601
TCM_018470 Theobroma cacao TCM_018470 I 0.601
Ca_10527 Cicer arietinum Ca_10527 I 0.601
Cla010510 Citrullus lanatus Cla010510 I 0.601
Pm015861 Prunus mume Pm015861 I 0.601
29822.m003500 Ricinus communis 29822.m003500 I 0.601
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I 0.601
cassava39955.m1 Manihot esculenta cassava39955.m1 I 0.601
Cucsa.158420 Cucumis sativus Cucsa.158420 I 0.601
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I 0.601
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I 0.601
Eucgr.I02255 Eucalyptus grandis Eucgr.I02255 I 0.601
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I 0.601
evm.TU.supercontig_3.138 Carica papaya evm.TU.supercontig_3.138 I 0.601
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I 0.601
Gorai.001G256300 Gossypium raimondii Gorai.001G256300 I 0.601
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I 0.601
MDP0000124827 Malus domestica MDP0000124827 I 0.601
MDP0000737128 Malus domestica MDP0000737128 I 0.601
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I 0.601
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I 0.601
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I 0.601
PK20392.1 Cannabis sativa PK20392.1 D 0.601
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I 0.601
HAT7 Arabidopsis thaliana AT5G15150 I 0.600
Bo2g012410 Brassica oleracea Bo2g012410 I 0.600
Bo3g010120 Brassica oleracea Bo3g010120 I 0.600
Bo9g165360 Brassica oleracea Bo9g165360 I 0.600
Bra006285 Brassica rapa Bra006285 I 0.600
Bra008717 Brassica rapa Bra008717 I 0.600
Bra023506 Brassica rapa Bra023506 I 0.600
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I 0.600
GLYMA09G37410 Glycine max GLYMA09G37410 I 0.600
GLYMA18G49290 Glycine max GLYMA18G49290 I 0.600
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I 0.600
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I 0.600
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I 0.600
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I 0.600
Carubv10001498m.g Capsella rubella Carubv10001498m.g I 0.600
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I 0.600
GSMUA_Achr6G36450_001 Musa acuminata GSMUA_Achr6G36450_001 I 0.599