SapurV1A.0154s0240 (Salix purpurea)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 SapurV1A.0154s0240 T181910_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.878 0.878
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0154s0240.1.p FAR1 86 188
SapurV1A.0154s0240.2.p FAR1 86 188
SapurV1A.0154s0240.3.p FAR1 86 188
SapurV1A.0154s0240.4.p FAR1 86 188
SapurV1A.0154s0240.5.p FAR1 86 188
SapurV1A.0154s0240.6.p FAR1 86 188
SapurV1A.0154s0240.7.p FAR1 86 188

Links

Other FAR1 family TFs
Other Salix purpurea TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I
AT4G03250 Arabidopsis thaliana AT4G03250 I
Bo9g006450 Brassica oleracea Bo9g006450 I
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I
Bra034196 Brassica rapa Bra034196 I
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I
Carubv10002996m.g Capsella rubella Carubv10002996m.g I
Ca_21400 Cicer arietinum Ca_21400 I
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I
Cla008712 Citrullus lanatus Cla008712 I
Cucsa.087050 Cucumis sativus Cucsa.087050 I
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I
GLYMA02G44910 Glycine max GLYMA02G44910 I
GLYMA04G15260 Glycine max GLYMA04G15260 I
GLYMA08G41330 Glycine max GLYMA08G41330 I
GLYMA14G03850 Glycine max GLYMA14G03850 I
GLYMA18G14910 Glycine max GLYMA18G14910 I
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I
MDP0000207866 Malus domestica MDP0000207866 I
mgf007720m Mimulus guttatus mgf007720m I
MTR_3g045830 Medicago truncatula MTR_3g045830 I
MTR_5g089870 Medicago truncatula MTR_5g089870 N
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I
PK25011.1 Cannabis sativa PK25011.1 D
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I