CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000006874
(
Oreochromis niloticus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSONIG00000006874
T199149_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000008673
Grainyhead
161
248
STYEEPVEKEMYHKNSSSGVGEFHHSLPADSFRYNLEATLSLRPRQGEGPMAYLNRGQFYSLTLSAAGFRSSLHQPRGKVGVTGVTSS
ENSONIP00000008673
Grainyhead
254
417
SLSSSDQCTVGGSELPQNSIVQSVIMVVFGEDKGRDEQLKNWKYWHSRQHTAKQRVLDIADYKESFNTIGNVEEIAYNAVSFTWDVSEEAKVFISVNCLSTDFSSQKGVKGMPLIIQIDTYSYNNGCGSRPIHRAYTQIKVFCDKGAERKLRDEEKKQLRKSMK
ENSONIP00000008674
Grainyhead
207
429
STYEEPVEKEMYHKNSSSGVGEFHHSLPADSFRYNLEATLSLRPRQGEGPMAYLNRGQFYSLTLSAAGFRSSLHQPRGKVGSVIMVVFGEDKGRDEQLKNWKYWHSRQHTAKQRVLDIADYKESFNTIGNVEEIAYNAVSFTWDVSEEAKVFISVNCLSTDFSSQKGVKGMPLIIQIDTYSYNNGCGSRPIHRAYTQIKVFCDKGAERKLRDEEKKQLRKSMK
Links
Other
Grainyhead
family TFs
Other
Oreochromis niloticus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27613.m000642
Ricinus communis
27613.m000642
N
0.000
29949.m000124
Ricinus communis
29949.m000124
N
0.000
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.000
Bo5g079990
Brassica oleracea
Bo5g079990
N
0.000
Bo6g022330
Brassica oleracea
Bo6g022330
N
0.000
Bo9g009240
Brassica oleracea
Bo9g009240
N
0.000
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
0.000
Bra018860
Brassica rapa
Bra018860
N
0.000
Bra026077
Brassica rapa
Bra026077
N
0.000
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
0.000
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.000
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.000
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.000
Ca_09786
Cicer arietinum
Ca_09786
N
0.000
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.000
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.000
Cla001429
Citrullus lanatus
Cla001429
N
0.000
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.000
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
0.000
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
0.000
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.000
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.000
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.000
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.000
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.000
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.000
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.000
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
0.000
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.000
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
0.000
LjSGA_018703.2
Lotus japonicus
LjSGA_018703.2
N
0.000
Lus10003772.g
Linum usitatissimum
Lus10003772.g
N
0.000
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.000
MDP0000152670
Malus domestica
MDP0000152670
N
0.000
MDP0000205236
Malus domestica
MDP0000205236
N
0.000
MDP0000284679
Malus domestica
MDP0000284679
N
0.000
MDP0000804652
Malus domestica
MDP0000804652
N
0.000
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.000
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.000
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.000
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.000
PK15082.1
Cannabis sativa
PK15082.1
N
0.000
Pm012019
Prunus mume
Pm012019
N
0.000
Pm015021
Prunus mume
Pm015021
N
0.000
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.000
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.000
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.000
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.000
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.000
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.000
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
0.000
SCL5
Arabidopsis thaliana
AT1G50600
N
0.000
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.000
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.000
TCM_002319
Theobroma cacao
TCM_002319
N
0.000
TCM_030733
Theobroma cacao
TCM_030733
N
0.000
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
0.000
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.000