Carubv10008830m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10008830m.g T202348_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008830m GRAS 159 529

Links

Other GRAS family TFs
Other Capsella rubella TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.748
29949.m000124 Ricinus communis 29949.m000124 N 0.716
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.745
Bo5g079990 Brassica oleracea Bo5g079990 N 0.921
Bo6g022330 Brassica oleracea Bo6g022330 N 0.976
Bo9g009240 Brassica oleracea Bo9g009240 N 0.740
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.970
Bra018860 Brassica rapa Bra018860 N 0.976
Bra026077 Brassica rapa Bra026077 N 0.976
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 1.000
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.751
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.717
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.753
Ca_09786 Cicer arietinum Ca_09786 N 0.715
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.715
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.702
Cla001429 Citrullus lanatus Cla001429 N 0.702
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.702
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.707
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.705
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.767
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.726
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.729
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.729
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.710
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.715
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.721
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.729
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.718
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.737
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.700
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.702
MDP0000152670 Malus domestica MDP0000152670 N 0.726
MDP0000205236 Malus domestica MDP0000205236 N 0.718
MDP0000284679 Malus domestica MDP0000284679 N 0.718
MDP0000804652 Malus domestica MDP0000804652 N 0.726
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.713
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.702
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.705
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.705
PK15082.1 Cannabis sativa PK15082.1 N 0.718
Pm012019 Prunus mume Pm012019 N 0.740
Pm015021 Prunus mume Pm015021 N 0.732
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.724
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.732
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.705
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.715
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.726
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.724
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.976
SCL5 Arabidopsis thaliana AT1G50600 N 0.976
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.721
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.702
TCM_002319 Theobroma cacao TCM_002319 N 0.726
TCM_030733 Theobroma cacao TCM_030733 N 0.764
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.957
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.718