Thhalv10015535m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10015535m.g T203205_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015535m GRAS 131 490

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g149920 Brassica oleracea Bo5g149920 I 0.763
Bo9g160170 Brassica oleracea Bo9g160170 I 0.874
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.774
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I 0.869
Bra013973 Brassica rapa Bra013973 I 0.874
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.768
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I 0.858
Carubv10003592m.g Capsella rubella Carubv10003592m.g I 0.858
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.772
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.712
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.734
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.734
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.712
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.718
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.702
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.702
MDP0000669451 Malus domestica MDP0000669451 I 0.729
Pm014329 Prunus mume Pm014329 I 0.743
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.704
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.706
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.740
RGL2 Arabidopsis thaliana AT3G03450 D 0.753
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.804
RGL3 Arabidopsis lyrata fgenesh2_kg.6__1749__AT5G17490.1 I 0.866
RGL3 Arabidopsis thaliana AT5G17490 I 0.863
TCM_019165 Theobroma cacao TCM_019165 N 0.713
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.765
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.723