Aquca_014_00610 (Aquilegia coerulea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Aquca_014_00610 T228042_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.610 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_014_00610.1 Homeodomain 18 74
Aquca_014_00610.2 Homeodomain 18 74
Aquca_014_00610.3 Homeodomain 18 74
Aquca_014_00610.4 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Aquilegia coerulea TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29811.m000540 Ricinus communis 29811.m000540 N 0.623
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.654
Bo9g006450 Brassica oleracea Bo9g006450 I 0.655
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.660
Bra034196 Brassica rapa Bra034196 I 0.655
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.660
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.660
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.606
Cla008712 Citrullus lanatus Cla008712 I 0.610
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.621
GLYMA01G06403 Glycine max GLYMA01G06403 N 0.600
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.622
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.622
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.616
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.622
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.616
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.691
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.707
MDP0000207866 Malus domestica MDP0000207866 I 0.608
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.643
PK25011.1 Cannabis sativa PK25011.1 D 0.610
POPTR_0001s28350 Populus trichocarpa POPTR_0001s28350 I 0.691
POPTR_0009s07600 Populus trichocarpa POPTR_0009s07600 I 0.691
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.606
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.691
SapurV1A.0106s0340 Salix purpurea SapurV1A.0106s0340 I 0.691
TCM_040945 Theobroma cacao TCM_040945 I 0.700
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.703
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.628