Cucsa.090310 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.090310 T284382_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.832 0.892
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.832 0.892
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.832 0.892
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.783 0.849
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.783 0.849
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.703 0.742
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.703 0.742
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.703 0.742
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.699 0.796
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.699 0.796
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.661 0.699
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.661 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.090310.1 Myb 14 61
Cucsa.090310.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

870 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000926 Ricinus communis 29661.m000926 I
29706.m001328 Ricinus communis 29706.m001328 I
29812.m000204 Ricinus communis 29812.m000204 I
29912.m005376 Ricinus communis 29912.m005376 I
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I
AT1G17520 Arabidopsis thaliana AT1G17520 I
AT1G72740 Arabidopsis thaliana AT1G72740 D
BGIOSGA003871 Oryza indica BGIOSGA003871 I
BGIOSGA004300 Oryza indica BGIOSGA004300 I
Bo3g184590 Brassica oleracea Bo3g184590 I
Bo5g023860 Brassica oleracea Bo5g023860 I
Bo5g077530 Brassica oleracea Bo5g077530 I
Bo6g018740 Brassica oleracea Bo6g018740 I
Bo6g116150 Brassica oleracea Bo6g116150 I
Bo8g067280 Brassica oleracea Bo8g067280 I
Bo8g104830 Brassica oleracea Bo8g104830 I
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I
Bostr.7128s0053 Boechera stricta Bostr.7128s0053 I
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I
Bra016037 Brassica rapa Bra016037 I
Bra016598 Brassica rapa Bra016598 I
Bra018818 Brassica rapa Bra018818 I
Bra025967 Brassica rapa Bra025967 I
Bra030894 Brassica rapa Bra030894 I
Bra030992 Brassica rapa Bra030992 I
Bra039650 Brassica rapa Bra039650 I
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I
Cagra.1262s0035 Capsella grandiflora Cagra.1262s0035 I
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I
Carubv10009763m.g Capsella rubella Carubv10009763m.g I
Carubv10009836m.g Capsella rubella Carubv10009836m.g I
Carubv10009890m.g Capsella rubella Carubv10009890m.g I
Carubv10020636m.g Capsella rubella Carubv10020636m.g I
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I
cassava34930.m1 Manihot esculenta cassava34930.m1 I
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I
Ca_02232 Cicer arietinum Ca_02232 I
Ca_02722 Cicer arietinum Ca_02722 I
Ca_08043 Cicer arietinum Ca_08043 I
Ca_09355 Cicer arietinum Ca_09355 I
Ca_10058 Cicer arietinum Ca_10058 I
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I
Cla012798 Citrullus lanatus Cla012798 I
Cla014248 Citrullus lanatus Cla014248 I
Cucsa.103240 Cucumis sativus Cucsa.103240 I
Cucsa.341020 Cucumis sativus Cucsa.341020 I
Eucgr.C00865 Eucalyptus grandis Eucgr.C00865 I
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I
GLYMA01G40220 Glycine max GLYMA01G40220 I
GLYMA05G22500 Glycine max GLYMA05G22500 I
GLYMA07G00930 Glycine max GLYMA07G00930 I
GLYMA08G20270 Glycine max GLYMA08G20270 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
GLYMA11G05070 Glycine max GLYMA11G05070 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GLYMA17G17370 Glycine max GLYMA17G17370 I
Gorai.001G013000 Gossypium raimondii Gorai.001G013000 I
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I
GRMZM2G087817 Zea mays GRMZM2G087817 I
GRMZM2G108424 Zea mays GRMZM2G108424 I
GRMZM2G136887 Zea mays GRMZM2G136887 I
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I
LPERR01G18090 Leersia perrieri LPERR01G18090 I
LPERR01G24270 Leersia perrieri LPERR01G24270 I
Lus10014653.g Linum usitatissimum Lus10014653.g I
Lus10027621.g Linum usitatissimum Lus10027621.g I
Lus10030935.g Linum usitatissimum Lus10030935.g I
Lus10033775.g Linum usitatissimum Lus10033775.g I
Lus10040111.g Linum usitatissimum Lus10040111.g I
MDP0000239354 Malus domestica MDP0000239354 I
MDP0000265359 Malus domestica MDP0000265359 I
mgf000125m Mimulus guttatus mgf000125m I
mgf007122m Mimulus guttatus mgf007122m I
mgf009594m Mimulus guttatus mgf009594m I
mgf010975m Mimulus guttatus mgf010975m I
mgf011386m Mimulus guttatus mgf011386m I
MLOC_10278 Hordeum vulgare MLOC_10278 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_2g099610 Medicago truncatula MTR_2g099610 I
MTR_4g097130 Medicago truncatula MTR_4g097130 I
MTR_8g018410 Medicago truncatula MTR_8g018410 I
OB01G37330 Oryza brachyantha OB01G37330 I
OBART01G21150 Oryza barthii OBART01G21150 I
OBART01G28260 Oryza barthii OBART01G28260 I
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I
OLONG_008666 Oryza longistaminata OLONG_008666 I
OLONG_011068 Oryza longistaminata OLONG_011068 I
OMERI01G19490 Oryza meridionalis OMERI01G19490 I
OMERI01G19510 Oryza meridionalis OMERI01G19510 I
OMERI05G07460 Oryza meridionalis OMERI05G07460 I
ONIVA01G23780 Oryza nivara ONIVA01G23780 I
ONIVA01G32190 Oryza nivara ONIVA01G32190 I
OPUNC01G21220 Oryza punctata OPUNC01G21220 I
OPUNC01G28080 Oryza punctata OPUNC01G28080 I
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I
OS01G0589300 Oryza sativa OS01G0589300 I
OS01G0708000 Oryza sativa OS01G0708000 D
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I
Pavir.J27218 Panicum virgatum Pavir.J27218 I
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I
PK00568.1 Cannabis sativa PK00568.1 I
PK06103.1 Cannabis sativa PK06103.1 D
Pm002374 Prunus mume Pm002374 I
Pm013309 Prunus mume Pm013309 I
Pm021139 Prunus mume Pm021139 I
Pm027209 Prunus mume Pm027209 I
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I
POPTR_0006s14940 Populus trichocarpa POPTR_0006s14940 I
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I
PRUPE_ppa016498mg Prunus persica PRUPE_ppa016498mg I
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I
SapurV1A.0087s0150 Salix purpurea SapurV1A.0087s0150 I
SapurV1A.0108s0150 Salix purpurea SapurV1A.0108s0150 I
Sb03g026470 Sorghum bicolor Sb03g026470 I
Sb03g032530 Sorghum bicolor Sb03g032530 I
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I
Si002403m.g Setaria italica Si002403m.g I
Si002467m.g Setaria italica Si002467m.g I
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I
TCM_000807 Theobroma cacao TCM_000807 I
TCM_029078 Theobroma cacao TCM_029078 I
TCM_037620 Theobroma cacao TCM_037620 I
TCM_042744 Theobroma cacao TCM_042744 I
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I
Thhalv10011866m.g Eutrema salsugineum Thhalv10011866m.g I
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I
TRB1 Arabidopsis thaliana AT1G49950 D
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I
TRIUR3_08672 Triticum urartu TRIUR3_08672 I
TRIUR3_10613 Triticum urartu TRIUR3_10613 I
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I