CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g062750.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc03g062750.1
T295833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g062750.1.1
NAC/NAM
4
122
QMGIRFHPTDTELINYLKRFFKGELCLNKQSPIQFADIYGDQPPWEIFEANSCKEKFRYFITPLRKRKMKDKRFCRTCAKGTWKGQTAEDLIRRNGMGPVVGFKRNFRFETSVCGQNKT
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28152.m000908
Ricinus communis
28152.m000908
I
30170.m013751
Ricinus communis
30170.m013751
I
AC211702.2_FG002
Zea mays
AC211702.2_FG002
I
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
AZF2
Arabidopsis thaliana
AT3G19580
D
AZF2
Arabidopsis lyrata
fgenesh2_kg.3__2173__AT3G19580.2
I
AZF3
Arabidopsis thaliana
AT5G43170
I
AZF3
Arabidopsis lyrata
scaffold_800768.1
I
BGIOSGA010468
Oryza indica
BGIOSGA010468
I
Bo1g081350
Brassica oleracea
Bo1g081350
I
Bo1g113530
Brassica oleracea
Bo1g113530
I
Bo2g168030
Brassica oleracea
Bo2g168030
I
Bo3g037560
Brassica oleracea
Bo3g037560
I
Bo3g142840
Brassica oleracea
Bo3g142840
I
Bo4g195370
Brassica oleracea
Bo4g195370
I
Bo5g052290
Brassica oleracea
Bo5g052290
I
Bo5g113850
Brassica oleracea
Bo5g113850
I
Bo7g048650
Brassica oleracea
Bo7g048650
I
Bo7g065200
Brassica oleracea
Bo7g065200
I
Bo9g019120
Brassica oleracea
Bo9g019120
I
Bo9g181170
Brassica oleracea
Bo9g181170
I
Bostr.13158s0058
Boechera stricta
Bostr.13158s0058
I
Bostr.15697s0099
Boechera stricta
Bostr.15697s0099
I
Bostr.19424s0704
Boechera stricta
Bostr.19424s0704
I
Bostr.2128s0015
Boechera stricta
Bostr.2128s0015
I
Bostr.25993s0262
Boechera stricta
Bostr.25993s0262
I
Bostr.26675s0176
Boechera stricta
Bostr.26675s0176
I
Bostr.3148s0159
Boechera stricta
Bostr.3148s0159
I
Bra000372
Brassica rapa
Bra000372
I
Bra009464
Brassica rapa
Bra009464
I
Bra010922
Brassica rapa
Bra010922
I
Bra012914
Brassica rapa
Bra012914
I
Bra018817
Brassica rapa
Bra018817
I
Bra022436
Brassica rapa
Bra022436
I
Bra029985
Brassica rapa
Bra029985
I
Bra031834
Brassica rapa
Bra031834
I
Bra032845
Brassica rapa
Bra032845
I
Bra033666
Brassica rapa
Bra033666
I
Bra037845
Brassica rapa
Bra037845
I
Bra038219
Brassica rapa
Bra038219
I
Bra040325
Brassica rapa
Bra040325
I
BRADI1G14750
Brachypodium distachyon
BRADI1G14750
I
BRADI1G16010
Brachypodium distachyon
BRADI1G16010
I
C2H2
Arabidopsis lyrata
scaffold_600374.1
I
Cagra.0239s0063
Capsella grandiflora
Cagra.0239s0063
I
Cagra.6011s0004
Capsella grandiflora
Cagra.6011s0004
I
Cagra.6943s0031
Capsella grandiflora
Cagra.6943s0031
I
Cagra.9217s0012
Capsella grandiflora
Cagra.9217s0012
I
Carubv10001868m.g
Capsella rubella
Carubv10001868m.g
I
Carubv10014391m.g
Capsella rubella
Carubv10014391m.g
I
Carubv10017660m.g
Capsella rubella
Carubv10017660m.g
I
Carubv10023569m.g
Capsella rubella
Carubv10023569m.g
I
cassava12475.valid.m1
Manihot esculenta
cassava12475.valid.m1
I
cassava32957.m1
Manihot esculenta
cassava32957.m1
I
cassava35732.valid.m1
Manihot esculenta
cassava35732.valid.m1
I
cassava43667.valid.m1
Manihot esculenta
cassava43667.valid.m1
I
Ca_01586
Cicer arietinum
Ca_01586
I
Ca_05641
Cicer arietinum
Ca_05641
I
Ca_18364
Cicer arietinum
Ca_18364
I
Ca_23672
Cicer arietinum
Ca_23672
I
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
chr5.CM0096.480.nc
Lotus japonicus
chr5.CM0096.480.nc
I
chr5.CM0200.550.nc
Lotus japonicus
chr5.CM0200.550.nc
I
Ciclev10002297m.g
Citrus clementina
Ciclev10002297m.g
I
Ciclev10020499m.g
Citrus clementina
Ciclev10020499m.g
I
Ciclev10029065m.g
Citrus clementina
Ciclev10029065m.g
I
Cla001400
Citrullus lanatus
Cla001400
I
Cla022966
Citrullus lanatus
Cla022966
I
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
Cucsa.395710
Cucumis sativus
Cucsa.395710
I
Eucgr.F02262
Eucalyptus grandis
Eucgr.F02262
I
Eucgr.G01247
Eucalyptus grandis
Eucgr.G01247
I
evm.TU.supercontig_2070.1
Carica papaya
evm.TU.supercontig_2070.1
I
evm.TU.supercontig_249.7
Carica papaya
evm.TU.supercontig_249.7
I
evm.TU.supercontig_6.32
Carica papaya
evm.TU.supercontig_6.32
I
fgenesh2_kg.4__2705__AT2G45120.1
Arabidopsis lyrata
fgenesh2_kg.4__2705__AT2G45120.1
I
gene02558-v1.0-hybrid
Fragaria vesca
gene02558-v1.0-hybrid
I
GLYMA01G18606
Glycine max
GLYMA01G18606
I
GLYMA01G32981
Glycine max
GLYMA01G32981
I
GLYMA03G03950
Glycine max
GLYMA03G03950
I
GLYMA04G04760
Glycine max
GLYMA04G04760
I
GLYMA06G04840
Glycine max
GLYMA06G04840
I
GLYMA10G40400
Glycine max
GLYMA10G40400
I
GLYMA14G09760
Glycine max
GLYMA14G09760
I
GLYMA17G35430
Glycine max
GLYMA17G35430
I
Gorai.001G175400
Gossypium raimondii
Gorai.001G175400
I
Gorai.002G132600
Gossypium raimondii
Gorai.002G132600
I
Gorai.004G164000
Gossypium raimondii
Gorai.004G164000
I
Gorai.005G232300
Gossypium raimondii
Gorai.005G232300
I
Gorai.008G020700
Gossypium raimondii
Gorai.008G020700
I
Gorai.010G025200
Gossypium raimondii
Gorai.010G025200
I
Gorai.013G050100
Gossypium raimondii
Gorai.013G050100
I
GRMZM2G455889
Zea mays
GRMZM2G455889
I
GSMUA_Achr2G13410_001
Musa acuminata
GSMUA_Achr2G13410_001
I
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
LPERR03G19200
Leersia perrieri
LPERR03G19200
I
LPERR03G21480
Leersia perrieri
LPERR03G21480
I
Lus10009278.g
Linum usitatissimum
Lus10009278.g
I
MDP0000198015
Malus domestica
MDP0000198015
I
MDP0000319225
Malus domestica
MDP0000319225
I
MDP0000573176
Malus domestica
MDP0000573176
I
MDP0000762756
Malus domestica
MDP0000762756
I
mgf006006m
Mimulus guttatus
mgf006006m
I
mgf022203m
Mimulus guttatus
mgf022203m
I
MTR_0160s0030
Medicago truncatula
MTR_0160s0030
I
MTR_1g018420
Medicago truncatula
MTR_1g018420
I
MTR_1g106730
Medicago truncatula
MTR_1g106730
I
MTR_3g102980
Medicago truncatula
MTR_3g102980
I
MTR_4g027440
Medicago truncatula
MTR_4g027440
I
OB03G31780
Oryza brachyantha
OB03G31780
I
OB03G42170
Oryza brachyantha
OB03G42170
I
OBART03G22570
Oryza barthii
OBART03G22570
I
OGLUM03G23350
Oryza glumaepatula
OGLUM03G23350
I
OLONG_027628
Oryza longistaminata
OLONG_027628
I
orange1.1g024499m.g
Citrus sinensis
orange1.1g024499m.g
I
orange1.1g038669m.g
Citrus sinensis
orange1.1g038669m.g
I
orange1.1g044606m.g
Citrus sinensis
orange1.1g044606m.g
I
ORGLA03G0210300
Oryza glaberrima
ORGLA03G0210300
I
ORUFI03G23240
Oryza rufipogon
ORUFI03G23240
I
OS03G0437200
Oryza sativa
OS03G0437200
I
PGSC0003DMG400002383
Solanum tuberosum
PGSC0003DMG400002383
I
PGSC0003DMG400011548
Solanum tuberosum
PGSC0003DMG400011548
I
PGSC0003DMG400028275
Solanum tuberosum
PGSC0003DMG400028275
I
PGSC0003DMG400034322
Solanum tuberosum
PGSC0003DMG400034322
I
PGSC0003DMG400041467
Solanum tuberosum
PGSC0003DMG400041467
I
PGSC0003DMG400045547
Solanum tuberosum
PGSC0003DMG400045547
I
PK10188.1
Cannabis sativa
PK10188.1
I
Pm005390
Prunus mume
Pm005390
I
Pm021284
Prunus mume
Pm021284
I
POPTR_0002s12010
Populus trichocarpa
POPTR_0002s12010
I
POPTR_0002s14460
Populus trichocarpa
POPTR_0002s14460
I
POPTR_0009s09250
Populus trichocarpa
POPTR_0009s09250
I
POPTR_0014s01760
Populus trichocarpa
POPTR_0014s01760
I
PRUPE_ppa009924mg
Prunus persica
PRUPE_ppa009924mg
I
PRUPE_ppa011060mg
Prunus persica
PRUPE_ppa011060mg
I
SapurV1A.0005s0440
Salix purpurea
SapurV1A.0005s0440
I
SapurV1A.0019s0280
Salix purpurea
SapurV1A.0019s0280
I
SapurV1A.0033s0440
Salix purpurea
SapurV1A.0033s0440
I
SapurV1A.0248s0230
Salix purpurea
SapurV1A.0248s0230
I
SapurV1A.0845s0100
Salix purpurea
SapurV1A.0845s0100
I
scaffold_503291.1
Arabidopsis lyrata
scaffold_503291.1
I
Solyc12g088390.1
Solanum lycopersicum
Solyc12g088390.1
I
STZ
Arabidopsis lyrata
fgenesh2_kg.1__2932__AT1G27730.1
I
TCM_000780
Theobroma cacao
TCM_000780
I
TCM_007214
Theobroma cacao
TCM_007214
I
TCM_034720
Theobroma cacao
TCM_034720
I
Thhalv10001538m.g
Eutrema salsugineum
Thhalv10001538m.g
I
Thhalv10010909m.g
Eutrema salsugineum
Thhalv10010909m.g
I
Thhalv10014546m.g
Eutrema salsugineum
Thhalv10014546m.g
I
Thhalv10021307m.g
Eutrema salsugineum
Thhalv10021307m.g
I
Traes_4BS_FE945D2FC
Triticum aestivum
Traes_4BS_FE945D2FC
I
VIT_03s0091g00690
Vitis vinifera
VIT_03s0091g00690
I
VIT_07s0129g00240
Vitis vinifera
VIT_07s0129g00240
I
VIT_15s0021g02720
Vitis vinifera
VIT_15s0021g02720
I
VIT_18s0001g09230
Vitis vinifera
VIT_18s0001g09230
I
ZAT10
Arabidopsis thaliana
AT1G27730
D
ZAT4
Arabidopsis thaliana
AT2G45120
D
ZAT6
Arabidopsis thaliana
AT5G04340
D
ZAT9
Arabidopsis thaliana
AT3G60580
D