Traes_7BL_F45C15FA2 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_7BL_F45C15FA2 T333015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7BL_F45C15FA2.1 Sox 1 52

Links

Other Sox family TFs
Other Triticum aestivum TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.420
ANCCAN_05715 Ancylostoma caninum ANCCAN_05715 N 0.471
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.477
Bo7g014280 Brassica oleracea Bo7g014280 I 0.420
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.430
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.471
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.430
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.430
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.438
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.430
Cob_06475 Colletotrichum orbiculare Cob_06475 N 0.421
Cucsa.272190 Cucumis sativus Cucsa.272190 I 0.419
D917_01243 Trichinella nativa D917_01243 N 0.507
D917_08464 Trichinella nativa D917_08464 N 0.507
DICVIV_04699 Dictyocaulus viviparus DICVIV_04699 N 0.422
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.489
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.444
EMIHUDRAFT_251194 Emiliania huxleyi EMIHUDRAFT_251194 N 0.427
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.420
F775_27510 Aegilops tauschii F775_27510 I 0.471
F775_32121 Aegilops tauschii F775_32121 N 0.438
gene00778-v1.0-hybrid Fragaria vesca gene00778-v1.0-hybrid N 0.451
GF20527 Drosophila ananassae FBgn0097533 N 0.444
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.524
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.613
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.476
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.476
GRMZM2G013821 Zea mays GRMZM2G013821 N 0.433
GRMZM2G156785 Zea mays GRMZM2G156785 N 0.433
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.471
GSMUA_Achr10G07270_001 Musa acuminata GSMUA_Achr10G07270_001 I 0.424
GSMUA_Achr11G07320_001 Musa acuminata GSMUA_Achr11G07320_001 I 0.442
GSMUA_Achr2G03630_001 Musa acuminata GSMUA_Achr2G03630_001 I 0.452
GSMUA_Achr9G21200_001 Musa acuminata GSMUA_Achr9G21200_001 I 0.452
GSMUA_AchrUn_randomG22010_001 Musa acuminata GSMUA_AchrUn_randomG22010_001 I 0.442
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.420
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.420
gw1.88.46.1 Fragilariopsis cylindrus gw1.88.46.1 N 0.429
HelroG167700 Helobdella robusta HelroG167700 N 0.469
HMGB2 Arabidopsis thaliana AT1G20693 I 0.430
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.430
HMGB3 Arabidopsis thaliana AT1G20696 I 0.537
LCUP018488 Lucilia cuprina LCUP018488 N 0.476
LPERR06G23570 Leersia perrieri LPERR06G23570 I 0.464
MAC_01051 Metarhizium acridum MAC_01051 N 0.422
MCINX003696 Melitaea cinxia MCINX003696 N 0.497
MDP0000242568 Malus domestica MDP0000242568 I 0.624
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.522
MLOC_78556 Hordeum vulgare MLOC_78556 I 0.471
MTR_5g024180 Medicago truncatula MTR_5g024180 I 0.489
OB06G35870 Oryza brachyantha OB06G35870 I 0.471
OBART06G28090 Oryza barthii OBART06G28090 I 0.464
OESDEN_13669 Oesophagostomum dentatum OESDEN_13669 N 0.437
OGLUM06G29480 Oryza glumaepatula OGLUM06G29480 I 0.464
OLONG_000335 Oryza longistaminata OLONG_000335 N 0.445
OLONG_007465 Oryza longistaminata OLONG_007465 I 0.464
OMERI06G28030 Oryza meridionalis OMERI06G28030 I 0.464
ONIVA06G31070 Oryza nivara ONIVA06G31070 I 0.464
OPUNC06G25640 Oryza punctata OPUNC06G25640 I 0.464
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.613
ORGLA06G0238300 Oryza glaberrima ORGLA06G0238300 I 0.464
ORUFI06G30030 Oryza rufipogon ORUFI06G30030 I 0.464
OS06G0728000 Oryza sativa OS06G0728000 I 0.464
Pavir.Db00040 Panicum virgatum Pavir.Db00040 I 0.464
Pavir.J04920 Panicum virgatum Pavir.J04920 I 0.464
PDK_20s1434871g001 Phoenix dactylifera PDK_20s1434871g001 I 0.558
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.682
Pm002934 Prunus mume Pm002934 I 0.420
PPAI008151 Phlebotomus papatasi PPAI008151 N 0.439
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.420
Sb10g030910 Sorghum bicolor Sb10g030910 I 0.471
Si007288m.g Setaria italica Si007288m.g I 0.464
Solyc03g032130.2 Solanum lycopersicum Solyc03g032130.2 N 0.508
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N 0.453
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.449
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N 0.533
Traes_5AL_D1358AF6E Triticum aestivum Traes_5AL_D1358AF6E I 0.431
Traes_5DL_BCFE39D13 Triticum aestivum Traes_5DL_BCFE39D13 N 0.467
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.707
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.707
TRIUR3_13577 Triticum urartu TRIUR3_13577 I 0.471
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.491
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.487