Lus10036723.g (Linum usitatissimum)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Lus10036723.g T350636_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10036723 Whirly 80 215

Links

Other Whirly family TFs
Other Linum usitatissimum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002027 Ricinus communis 29736.m002027 N 0.860
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.750
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.743
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.809
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.816
Bo7g080560 Brassica oleracea Bo7g080560 N 0.816
Bo8g066030 Brassica oleracea Bo8g066030 N 0.831
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.801
Bra016702 Brassica rapa Bra016702 N 0.846
Bra024809 Brassica rapa Bra024809 N 0.831
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.801
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.824
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.816
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.801
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.882
Ca_24297 Cicer arietinum Ca_24297 N 0.706
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.853
Cla022217 Citrullus lanatus Cla022217 N 0.824
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.794
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.831
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.846
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.728
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.743
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.831
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.772
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.792
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.720
MDP0000268451 Malus domestica MDP0000268451 N 0.868
mgf002465m Mimulus guttatus mgf002465m N 0.824
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.713
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.853
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.713
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.706
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.846
PK22670.1 Cannabis sativa PK22670.1 N 0.824
Pm006558 Prunus mume Pm006558 N 0.846
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.831
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.831
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.846
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.831
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.706
Si006951m.g Setaria italica Si006951m.g N 0.713
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.838
TCM_011795 Theobroma cacao TCM_011795 N 0.831
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.816
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.713
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.838
WHY1 Arabidopsis thaliana AT1G14410 N 0.809
WHY3 Arabidopsis thaliana AT2G02740 N 0.816