Cla017778 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla017778 T006496_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.798 0.960
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.752 0.860
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.679 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla017778 AP2 47 98

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.795
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.688
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.798
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.679
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.752
DREB2F Arabidopsis thaliana AT3G57600 D 0.752
DREB2G Arabidopsis thaliana AT5G18450 D 0.679
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.679
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.752
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.785
Bo4g111040 Brassica oleracea Bo4g111040 I 0.744
Bo6g073020 Brassica oleracea Bo6g073020 I 0.756
Bo8g092010 Brassica oleracea Bo8g092010 I 0.755
Bo9g155940 Brassica oleracea Bo9g155940 I 0.679
Bra014617 Brassica rapa Bra014617 I 0.744
Bra007341 Brassica rapa Bra007341 I 0.755
Bra002159 Brassica rapa Bra002159 I 0.679
PK08602.1 Cannabis sativa PK08602.1 D 0.798
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.752
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.752
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.680
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.771
Ca_07264 Cicer arietinum Ca_07264 I 0.789
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.779
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.779
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.817
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.765
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.679
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.746
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.679
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.789
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.789
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.745
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.785
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.785
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.789
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.785
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.775
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.780
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.780
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.780
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.785
MDP0000871361 Malus domestica MDP0000871361 I 0.784
MDP0000703626 Malus domestica MDP0000703626 I 0.784
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.789
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.789
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.789
mgf017629m Mimulus guttatus mgf017629m I 0.683
OBART03G05550 Oryza barthii OBART03G05550 I 0.785
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.785
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.785
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.785
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.785
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.785
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.785
DREB2E Oryza sativa OS03G0174400 I 0.785
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.785
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.785
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.729
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.748
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.769
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.789
Pm025865 Prunus mume Pm025865 I 0.784
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.784
27810.m000639 Ricinus communis 27810.m000639 I 0.789
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.764
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.789
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.748
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.748
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.756
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.789
TCM_024756 Theobroma cacao TCM_024756 I 0.779
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.775
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.789
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.785
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.785
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.766